Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LMNAP02545 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.72■□□□□ 0.11
LMNAP02545 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LMNAP02545 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
LMNAP02545 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
LMNAP02545 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LMNAP02545 AC041040.2-201ENST00000622926 2899 ntBASIC15.72■□□□□ 0.11
LMNAP02545 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
LMNAP02545 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LMNAP02545 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
LMNAP02545 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.72■□□□□ 0.11
LMNAP02545 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
LMNAP02545 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LMNAP02545 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.71■□□□□ 0.11
LMNAP02545 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LMNAP02545 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LMNAP02545 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LMNAP02545 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LMNAP02545 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
LMNAP02545 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LMNAP02545 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LMNAP02545 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LMNAP02545 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LMNAP02545 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.71■□□□□ 0.11
LMNAP02545 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LMNAP02545 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LMNAP02545 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
LMNAP02545 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LMNAP02545 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LMNAP02545 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
LMNAP02545 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
LMNAP02545 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LMNAP02545 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LMNAP02545 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LMNAP02545 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LMNAP02545 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LMNAP02545 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LMNAP02545 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LMNAP02545 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LMNAP02545 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.71■□□□□ 0.11
LMNAP02545 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.71■□□□□ 0.11
LMNAP02545 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.71■□□□□ 0.11
LMNAP02545 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.71■□□□□ 0.11
LMNAP02545 FTLP10-202ENST00000505798 471 ntBASIC15.71■□□□□ 0.11
LMNAP02545 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.71■□□□□ 0.11
LMNAP02545 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.71■□□□□ 0.11
LMNAP02545 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.71■□□□□ 0.11
LMNAP02545 AC138969.2-201ENST00000532739 9932 ntBASIC15.71■□□□□ 0.11
LMNAP02545 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.71■□□□□ 0.11
LMNAP02545 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LMNAP02545 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LMNAP02545 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LMNAP02545 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
LMNAP02545 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LMNAP02545 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LMNAP02545 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LMNAP02545 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LMNAP02545 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LMNAP02545 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.71■□□□□ 0.11
LMNAP02545 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LMNAP02545 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LMNAP02545 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.71■□□□□ 0.11
LMNAP02545 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LMNAP02545 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LMNAP02545 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
LMNAP02545 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.1
LMNAP02545 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.71■□□□□ 0.1
LMNAP02545 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
LMNAP02545 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
LMNAP02545 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LMNAP02545 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.71■□□□□ 0.1
LMNAP02545 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.71■□□□□ 0.1
LMNAP02545 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LMNAP02545 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LMNAP02545 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
LMNAP02545 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LMNAP02545 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.7■□□□□ 0.1
LMNAP02545 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LMNAP02545 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
LMNAP02545 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LMNAP02545 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LMNAP02545 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LMNAP02545 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LMNAP02545 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LMNAP02545 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LMNAP02545 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LMNAP02545 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.7■□□□□ 0.1
LMNAP02545 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LMNAP02545 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.7■□□□□ 0.1
LMNAP02545 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC15.7■□□□□ 0.1
LMNAP02545 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.7■□□□□ 0.1
LMNAP02545 FAM197Y7-201ENST00000432892 766 ntBASIC15.7■□□□□ 0.1
LMNAP02545 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LMNAP02545 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.7■□□□□ 0.1
LMNAP02545 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC15.7■□□□□ 0.1
LMNAP02545 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.7■□□□□ 0.1
LMNAP02545 AC078819.1-201ENST00000547454 765 ntBASIC15.7■□□□□ 0.1
LMNAP02545 AC012085.1-201ENST00000548270 765 ntBASIC15.7■□□□□ 0.1
LMNAP02545 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
LMNAP02545 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms