Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC040169.1-201ENST00000565382 521 ntBASIC12.92□□□□□ -0.34
HLA-DQB1P01920 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
HLA-DQB1P01920 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.92□□□□□ -0.34
HLA-DQB1P01920 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.92□□□□□ -0.34
HLA-DQB1P01920 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DQB1P01920 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DQB1P01920 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.92□□□□□ -0.34
HLA-DQB1P01920 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC12.92□□□□□ -0.34
HLA-DQB1P01920 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.92□□□□□ -0.34
HLA-DQB1P01920 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DQB1P01920 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DQB1P01920 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DQB1P01920 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.92□□□□□ -0.34
HLA-DQB1P01920 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DQB1P01920 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DQB1P01920 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DQB1P01920 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DQB1P01920 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DQB1P01920 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
HLA-DQB1P01920 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 AC215219.1-201ENST00000400706 1817 ntBASIC12.91□□□□□ -0.34
HLA-DQB1P01920 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 AC069335.1-201ENST00000489972 472 ntBASIC12.91□□□□□ -0.34
HLA-DQB1P01920 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 KLK8-205ENST00000593490 267 ntTSL 3 BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 AL133215.2-201ENST00000609242 977 ntBASIC12.91□□□□□ -0.34
HLA-DQB1P01920 AC120114.3-201ENST00000611923 658 ntBASIC12.91□□□□□ -0.34
HLA-DQB1P01920 C20orf181-201ENST00000623918 480 ntBASIC12.91□□□□□ -0.34
HLA-DQB1P01920 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DQB1P01920 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DQB1P01920 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DQB1P01920 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.9□□□□□ -0.34
HLA-DQB1P01920 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DQB1P01920 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DQB1P01920 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DQB1P01920 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
HLA-DQB1P01920 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DQB1P01920 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
HLA-DQB1P01920 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DQB1P01920 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DQB1P01920 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.9□□□□□ -0.34
HLA-DQB1P01920 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DQB1P01920 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.9□□□□□ -0.34
HLA-DQB1P01920 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC12.9□□□□□ -0.34
HLA-DQB1P01920 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DQB1P01920 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.9□□□□□ -0.34
HLA-DQB1P01920 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DQB1P01920 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DQB1P01920 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.9□□□□□ -0.34
HLA-DQB1P01920 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DQB1P01920 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.9□□□□□ -0.34
HLA-DQB1P01920 MKNK2P1-201ENST00000437526 628 ntBASIC12.9□□□□□ -0.34
HLA-DQB1P01920 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms