Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.35□□□□□ -0.27
CNOT4O95628 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.35□□□□□ -0.27
CNOT4O95628 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.35□□□□□ -0.27
CNOT4O95628 AC138951.2-201ENST00000623455 1161 ntBASIC13.35□□□□□ -0.27
CNOT4O95628 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.35□□□□□ -0.27
CNOT4O95628 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNOT4O95628 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNOT4O95628 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNOT4O95628 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
CNOT4O95628 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
CNOT4O95628 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNOT4O95628 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNOT4O95628 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
CNOT4O95628 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNOT4O95628 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNOT4O95628 AHCYP2-201ENST00000430630 1300 ntBASIC13.35□□□□□ -0.27
CNOT4O95628 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNOT4O95628 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CNOT4O95628 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CNOT4O95628 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.35□□□□□ -0.27
CNOT4O95628 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNOT4O95628 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CNOT4O95628 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CNOT4O95628 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.35□□□□□ -0.27
CNOT4O95628 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CNOT4O95628 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CNOT4O95628 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNOT4O95628 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.34□□□□□ -0.27
CNOT4O95628 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.34□□□□□ -0.27
CNOT4O95628 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNOT4O95628 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CNOT4O95628 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.34□□□□□ -0.27
CNOT4O95628 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNOT4O95628 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CNOT4O95628 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
CNOT4O95628 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.34□□□□□ -0.27
CNOT4O95628 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CNOT4O95628 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNOT4O95628 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.34□□□□□ -0.27
CNOT4O95628 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.34□□□□□ -0.27
CNOT4O95628 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNOT4O95628 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.34□□□□□ -0.27
CNOT4O95628 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CNOT4O95628 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.34□□□□□ -0.27
CNOT4O95628 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
CNOT4O95628 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CNOT4O95628 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNOT4O95628 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CNOT4O95628 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CNOT4O95628 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNOT4O95628 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNOT4O95628 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNOT4O95628 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNOT4O95628 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNOT4O95628 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CNOT4O95628 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNOT4O95628 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.34□□□□□ -0.27
CNOT4O95628 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC13.34□□□□□ -0.27
CNOT4O95628 YBX1P6-201ENST00000442962 1002 ntBASIC13.34□□□□□ -0.27
CNOT4O95628 AC099548.2-209ENST00000480264 625 ntBASIC13.34□□□□□ -0.27
CNOT4O95628 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.34□□□□□ -0.27
CNOT4O95628 DUX4L45-201ENST00000566406 1057 ntBASIC13.34□□□□□ -0.27
CNOT4O95628 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.34□□□□□ -0.27
CNOT4O95628 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.34□□□□□ -0.27
CNOT4O95628 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.34□□□□□ -0.27
CNOT4O95628 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.34□□□□□ -0.27
CNOT4O95628 AC244669.2-201ENST00000612320 853 ntBASIC13.34□□□□□ -0.27
CNOT4O95628 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.34□□□□□ -0.27
CNOT4O95628 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CNOT4O95628 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNOT4O95628 AC055811.4-201ENST00000624039 1754 ntBASIC13.34□□□□□ -0.27
CNOT4O95628 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.34□□□□□ -0.27
CNOT4O95628 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.34□□□□□ -0.27
CNOT4O95628 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CNOT4O95628 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.34□□□□□ -0.27
CNOT4O95628 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNOT4O95628 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNOT4O95628 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.34□□□□□ -0.27
CNOT4O95628 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.34□□□□□ -0.27
CNOT4O95628 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CNOT4O95628 AC023024.2-201ENST00000623561 1993 ntBASIC13.34□□□□□ -0.27
CNOT4O95628 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC13.34□□□□□ -0.27
CNOT4O95628 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
CNOT4O95628 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.34□□□□□ -0.27
CNOT4O95628 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CNOT4O95628 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNOT4O95628 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNOT4O95628 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNOT4O95628 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CNOT4O95628 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CNOT4O95628 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CNOT4O95628 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.34□□□□□ -0.27
CNOT4O95628 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CNOT4O95628 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNOT4O95628 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CNOT4O95628 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNOT4O95628 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
CNOT4O95628 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CNOT4O95628 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CNOT4O95628 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms