Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 AL358472.3-201ENST00000608147 415 ntBASIC16.06■□□□□ 0.16
CSPG5O95196 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG5O95196 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG5O95196 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG5O95196 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG5O95196 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG5O95196 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG5O95196 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG5O95196 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG5O95196 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG5O95196 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.06■□□□□ 0.16
CSPG5O95196 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG5O95196 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CSPG5O95196 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.06■□□□□ 0.16
CSPG5O95196 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.06■□□□□ 0.16
CSPG5O95196 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG5O95196 LINC02228-204ENST00000642115 2962 ntBASIC16.05■□□□□ 0.16
CSPG5O95196 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG5O95196 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG5O95196 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CSPG5O95196 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG5O95196 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG5O95196 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CSPG5O95196 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.05■□□□□ 0.16
CSPG5O95196 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG5O95196 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG5O95196 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.05■□□□□ 0.16
CSPG5O95196 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG5O95196 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CSPG5O95196 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CSPG5O95196 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG5O95196 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG5O95196 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.05■□□□□ 0.16
CSPG5O95196 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG5O95196 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG5O95196 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.05■□□□□ 0.16
CSPG5O95196 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG5O95196 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG5O95196 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG5O95196 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.05■□□□□ 0.16
CSPG5O95196 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG5O95196 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG5O95196 AL645937.2-201ENST00000396808 931 ntBASIC16.05■□□□□ 0.16
CSPG5O95196 AL008707.1-201ENST00000422498 534 ntBASIC16.05■□□□□ 0.16
CSPG5O95196 ISCA2P1-201ENST00000425548 448 ntBASIC16.05■□□□□ 0.16
CSPG5O95196 HLA-K-203ENST00000430151 1046 ntBASIC16.05■□□□□ 0.16
CSPG5O95196 CEP164P1-201ENST00000455142 418 ntBASIC16.05■□□□□ 0.16
CSPG5O95196 RPL18P13-201ENST00000478088 569 ntBASIC16.05■□□□□ 0.16
CSPG5O95196 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG5O95196 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
CSPG5O95196 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG5O95196 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG5O95196 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.05■□□□□ 0.16
CSPG5O95196 AL161670.2-201ENST00000557650 1227 ntBASIC16.05■□□□□ 0.16
CSPG5O95196 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.05■□□□□ 0.16
CSPG5O95196 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.05■□□□□ 0.16
CSPG5O95196 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.05■□□□□ 0.16
CSPG5O95196 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.05■□□□□ 0.16
CSPG5O95196 AC008805.1-201ENST00000590892 364 ntBASIC16.05■□□□□ 0.16
CSPG5O95196 AC018635.2-201ENST00000608625 364 ntBASIC16.05■□□□□ 0.16
CSPG5O95196 RN7SL736P-201ENST00000613111 269 ntBASIC16.05■□□□□ 0.16
CSPG5O95196 AC002472.3-201ENST00000640124 621 ntBASIC16.05■□□□□ 0.16
CSPG5O95196 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG5O95196 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG5O95196 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG5O95196 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG5O95196 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG5O95196 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG5O95196 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG5O95196 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG5O95196 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG5O95196 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CSPG5O95196 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG5O95196 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.05■□□□□ 0.16
CSPG5O95196 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG5O95196 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CSPG5O95196 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.04■□□□□ 0.16
CSPG5O95196 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.04■□□□□ 0.16
CSPG5O95196 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG5O95196 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG5O95196 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CSPG5O95196 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG5O95196 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG5O95196 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG5O95196 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG5O95196 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
CSPG5O95196 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG5O95196 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG5O95196 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG5O95196 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG5O95196 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG5O95196 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG5O95196 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG5O95196 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.04■□□□□ 0.16
CSPG5O95196 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG5O95196 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG5O95196 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.04■□□□□ 0.16
CSPG5O95196 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.04■□□□□ 0.16
CSPG5O95196 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG5O95196 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms