Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC6.44□□□□□ -1.38
USH2AO75445 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC6.44□□□□□ -1.38
USH2AO75445 KRT8P18-201ENST00000413425 1445 ntBASIC6.44□□□□□ -1.38
USH2AO75445 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC6.44□□□□□ -1.38
USH2AO75445 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
USH2AO75445 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 AC103563.1-201ENST00000429316 123 ntBASIC6.44□□□□□ -1.38
USH2AO75445 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC6.44□□□□□ -1.38
USH2AO75445 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC6.44□□□□□ -1.38
USH2AO75445 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC6.44□□□□□ -1.38
USH2AO75445 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC6.44□□□□□ -1.38
USH2AO75445 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC6.44□□□□□ -1.38
USH2AO75445 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
USH2AO75445 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 FAM21EP-201ENST00000417804 985 ntBASIC6.44□□□□□ -1.38
USH2AO75445 LINC01664-202ENST00000441544 1175 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC6.44□□□□□ -1.38
USH2AO75445 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC6.44□□□□□ -1.38
USH2AO75445 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC6.44□□□□□ -1.38
USH2AO75445 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC6.44□□□□□ -1.38
USH2AO75445 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 OR3A1-202ENST00000615105 966 ntBASIC6.44□□□□□ -1.38
USH2AO75445 AL590556.2-202ENST00000636906 844 ntBASIC6.44□□□□□ -1.38
USH2AO75445 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC6.44□□□□□ -1.38
USH2AO75445 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 SP100-205ENST00000409824 1802 ntTSL 5 BASIC6.44□□□□□ -1.38
USH2AO75445 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC6.44□□□□□ -1.38
USH2AO75445 OAZ3-201ENST00000321531 851 ntTSL 5 BASIC6.44□□□□□ -1.38
USH2AO75445 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC6.44□□□□□ -1.38
USH2AO75445 KRT18P4-201ENST00000422599 1288 ntBASIC6.44□□□□□ -1.38
USH2AO75445 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 AC112694.1-202ENST00000540985 943 ntBASIC6.44□□□□□ -1.38
USH2AO75445 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC6.44□□□□□ -1.38
USH2AO75445 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC6.44□□□□□ -1.38
USH2AO75445 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC6.44□□□□□ -1.38
USH2AO75445 MED25-209ENST00000612791 881 ntTSL 5 BASIC6.44□□□□□ -1.38
USH2AO75445 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC6.44□□□□□ -1.38
USH2AO75445 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
USH2AO75445 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC6.44□□□□□ -1.38
USH2AO75445 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
USH2AO75445 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
USH2AO75445 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC6.43□□□□□ -1.38
USH2AO75445 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 ASS1P2-201ENST00000439895 1223 ntBASIC6.43□□□□□ -1.38
USH2AO75445 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC6.43□□□□□ -1.38
USH2AO75445 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC6.43□□□□□ -1.38
USH2AO75445 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC6.43□□□□□ -1.38
USH2AO75445 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC6.43□□□□□ -1.38
USH2AO75445 GGNBP1-204ENST00000613113 887 ntBASIC6.43□□□□□ -1.38
USH2AO75445 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC6.43□□□□□ -1.38
USH2AO75445 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC6.43□□□□□ -1.38
USH2AO75445 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC6.43□□□□□ -1.38
USH2AO75445 PCDHA12-202ENST00000613593 2588 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms