Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 CR382287.1-201ENST00000623954 586 ntBASIC13.32□□□□□ -0.28
TRAF3IP2O43734 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 AC138969.2-201ENST00000532739 9932 ntBASIC13.32□□□□□ -0.28
TRAF3IP2O43734 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 AC023908.3-201ENST00000564211 3047 ntBASIC13.31□□□□□ -0.28
TRAF3IP2O43734 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 TPM3P8-201ENST00000330554 643 ntBASIC13.31□□□□□ -0.28
TRAF3IP2O43734 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 FTLP10-202ENST00000505798 471 ntBASIC13.31□□□□□ -0.28
TRAF3IP2O43734 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 KRT90P-201ENST00000549264 1064 ntBASIC13.31□□□□□ -0.28
TRAF3IP2O43734 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 AC244669.2-201ENST00000612320 853 ntBASIC13.31□□□□□ -0.28
TRAF3IP2O43734 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 AP001267.2-201ENST00000532619 2086 ntBASIC13.31□□□□□ -0.28
TRAF3IP2O43734 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF3IP2O43734 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 FAM197Y7-201ENST00000432892 766 ntBASIC13.3□□□□□ -0.28
TRAF3IP2O43734 AC016694.1-201ENST00000434179 700 ntBASIC13.3□□□□□ -0.28
TRAF3IP2O43734 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 GAPDHP21-201ENST00000450301 1010 ntBASIC13.3□□□□□ -0.28
TRAF3IP2O43734 AL391280.1-201ENST00000506969 1062 ntBASIC13.3□□□□□ -0.28
TRAF3IP2O43734 RNA5SP486-201ENST00000515961 83 ntBASIC13.3□□□□□ -0.28
TRAF3IP2O43734 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms