Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
HOXA2O43364 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.83■□□□□ 0.13
HOXA2O43364 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
HOXA2O43364 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HOXA2O43364 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HOXA2O43364 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.83■□□□□ 0.13
HOXA2O43364 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HOXA2O43364 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HOXA2O43364 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
HOXA2O43364 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HOXA2O43364 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.83■□□□□ 0.12
HOXA2O43364 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HOXA2O43364 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HOXA2O43364 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HOXA2O43364 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.83■□□□□ 0.12
HOXA2O43364 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC15.83■□□□□ 0.12
HOXA2O43364 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HOXA2O43364 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HOXA2O43364 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.83■□□□□ 0.12
HOXA2O43364 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.83■□□□□ 0.12
HOXA2O43364 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC15.83■□□□□ 0.12
HOXA2O43364 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.83■□□□□ 0.12
HOXA2O43364 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC15.83■□□□□ 0.12
HOXA2O43364 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC15.83■□□□□ 0.12
HOXA2O43364 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HOXA2O43364 IQSEC3P1-201ENST00000538799 536 ntBASIC15.83■□□□□ 0.12
HOXA2O43364 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.83■□□□□ 0.12
HOXA2O43364 AL031713.1-201ENST00000564813 661 ntBASIC15.83■□□□□ 0.12
HOXA2O43364 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.83■□□□□ 0.12
HOXA2O43364 MIR3147-201ENST00000577811 66 ntBASIC15.83■□□□□ 0.12
HOXA2O43364 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC15.83■□□□□ 0.12
HOXA2O43364 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC15.83■□□□□ 0.12
HOXA2O43364 U62317.3-201ENST00000608319 855 ntBASIC15.83■□□□□ 0.12
HOXA2O43364 AC018635.2-201ENST00000608625 364 ntBASIC15.83■□□□□ 0.12
HOXA2O43364 OR13I1P-201ENST00000609811 1264 ntBASIC15.83■□□□□ 0.12
HOXA2O43364 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HOXA2O43364 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HOXA2O43364 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC15.83■□□□□ 0.12
HOXA2O43364 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
HOXA2O43364 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HOXA2O43364 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.83■□□□□ 0.12
HOXA2O43364 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.83■□□□□ 0.12
HOXA2O43364 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HOXA2O43364 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.83■□□□□ 0.12
HOXA2O43364 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HOXA2O43364 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HOXA2O43364 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
HOXA2O43364 AC008894.3-201ENST00000624324 3103 ntBASIC15.83■□□□□ 0.12
HOXA2O43364 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
HOXA2O43364 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.82■□□□□ 0.12
HOXA2O43364 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HOXA2O43364 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HOXA2O43364 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HOXA2O43364 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
HOXA2O43364 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HOXA2O43364 MBP-201ENST00000354542 575 ntTSL 2 BASIC15.82■□□□□ 0.12
HOXA2O43364 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HOXA2O43364 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC15.82■□□□□ 0.12
HOXA2O43364 RPL17P11-201ENST00000417593 544 ntBASIC15.82■□□□□ 0.12
HOXA2O43364 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC15.82■□□□□ 0.12
HOXA2O43364 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC15.82■□□□□ 0.12
HOXA2O43364 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HOXA2O43364 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HOXA2O43364 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15.82■□□□□ 0.12
HOXA2O43364 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC15.82■□□□□ 0.12
HOXA2O43364 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
HOXA2O43364 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC15.82■□□□□ 0.12
HOXA2O43364 MIR5572-201ENST00000583188 137 ntBASIC15.82■□□□□ 0.12
HOXA2O43364 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.82■□□□□ 0.12
HOXA2O43364 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.82■□□□□ 0.12
HOXA2O43364 AC073352.2-201ENST00000609385 439 ntBASIC15.82■□□□□ 0.12
HOXA2O43364 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
HOXA2O43364 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.82■□□□□ 0.12
HOXA2O43364 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC15.82■□□□□ 0.12
HOXA2O43364 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HOXA2O43364 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HOXA2O43364 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HOXA2O43364 TMBIM7P-202ENST00000641474 1516 ntBASIC15.82■□□□□ 0.12
HOXA2O43364 AL590440.2-201ENST00000641973 1595 ntBASIC15.82■□□□□ 0.12
HOXA2O43364 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
HOXA2O43364 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HOXA2O43364 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HOXA2O43364 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.82■□□□□ 0.12
HOXA2O43364 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.82■□□□□ 0.12
HOXA2O43364 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HOXA2O43364 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HOXA2O43364 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HOXA2O43364 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
HOXA2O43364 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.82■□□□□ 0.12
HOXA2O43364 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.82■□□□□ 0.12
HOXA2O43364 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.82■□□□□ 0.12
HOXA2O43364 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HOXA2O43364 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HOXA2O43364 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HOXA2O43364 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HOXA2O43364 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.81■□□□□ 0.12
HOXA2O43364 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HOXA2O43364 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HOXA2O43364 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.81■□□□□ 0.12
HOXA2O43364 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms