Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.12□□□□□ -0.15
CLIC1O00299 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.12□□□□□ -0.15
CLIC1O00299 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.12□□□□□ -0.15
CLIC1O00299 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
CLIC1O00299 AC138649.4-201ENST00000612222 287 ntBASIC14.12□□□□□ -0.15
CLIC1O00299 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.12□□□□□ -0.15
CLIC1O00299 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.12□□□□□ -0.15
CLIC1O00299 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLIC1O00299 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.12□□□□□ -0.15
CLIC1O00299 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLIC1O00299 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLIC1O00299 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
CLIC1O00299 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.12□□□□□ -0.15
CLIC1O00299 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CLIC1O00299 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.12□□□□□ -0.15
CLIC1O00299 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLIC1O00299 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLIC1O00299 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CLIC1O00299 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
CLIC1O00299 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CLIC1O00299 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLIC1O00299 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLIC1O00299 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CLIC1O00299 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CLIC1O00299 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLIC1O00299 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLIC1O00299 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLIC1O00299 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CLIC1O00299 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CLIC1O00299 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLIC1O00299 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.11□□□□□ -0.15
CLIC1O00299 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLIC1O00299 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLIC1O00299 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.11□□□□□ -0.15
CLIC1O00299 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.11□□□□□ -0.15
CLIC1O00299 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLIC1O00299 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLIC1O00299 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.11□□□□□ -0.15
CLIC1O00299 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLIC1O00299 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLIC1O00299 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLIC1O00299 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLIC1O00299 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLIC1O00299 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLIC1O00299 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLIC1O00299 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLIC1O00299 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.11□□□□□ -0.15
CLIC1O00299 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLIC1O00299 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CLIC1O00299 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CLIC1O00299 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.11□□□□□ -0.15
CLIC1O00299 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLIC1O00299 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.11□□□□□ -0.15
CLIC1O00299 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.11□□□□□ -0.15
CLIC1O00299 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLIC1O00299 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.11□□□□□ -0.15
CLIC1O00299 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.11□□□□□ -0.15
CLIC1O00299 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.11□□□□□ -0.15
CLIC1O00299 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.11□□□□□ -0.15
CLIC1O00299 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CLIC1O00299 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLIC1O00299 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.11□□□□□ -0.15
CLIC1O00299 DOC2GP-202ENST00000514950 1163 ntBASIC14.11□□□□□ -0.15
CLIC1O00299 AC022616.1-201ENST00000518688 554 ntBASIC14.11□□□□□ -0.15
CLIC1O00299 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.11□□□□□ -0.15
CLIC1O00299 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.11□□□□□ -0.15
CLIC1O00299 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.11□□□□□ -0.15
CLIC1O00299 KRT8P22-201ENST00000562317 1415 ntBASIC14.11□□□□□ -0.15
CLIC1O00299 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.11□□□□□ -0.15
CLIC1O00299 BRI3BPP1-201ENST00000594224 787 ntBASIC14.11□□□□□ -0.15
CLIC1O00299 AL390955.2-201ENST00000603032 514 ntBASIC14.11□□□□□ -0.15
CLIC1O00299 AC004790.1-201ENST00000612686 536 ntBASIC14.11□□□□□ -0.15
CLIC1O00299 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.11□□□□□ -0.15
CLIC1O00299 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.11□□□□□ -0.15
CLIC1O00299 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLIC1O00299 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLIC1O00299 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CLIC1O00299 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLIC1O00299 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLIC1O00299 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CLIC1O00299 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLIC1O00299 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CLIC1O00299 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLIC1O00299 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CLIC1O00299 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLIC1O00299 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.11□□□□□ -0.15
CLIC1O00299 AC126335.2-201ENST00000623362 4637 ntBASIC14.11□□□□□ -0.15
CLIC1O00299 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CLIC1O00299 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.11□□□□□ -0.15
CLIC1O00299 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.11□□□□□ -0.15
CLIC1O00299 AC016397.2-201ENST00000624848 1985 ntBASIC14.11□□□□□ -0.15
CLIC1O00299 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLIC1O00299 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.11□□□□□ -0.15
CLIC1O00299 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLIC1O00299 AC090505.1-201ENST00000430515 1834 ntBASIC14.11□□□□□ -0.15
CLIC1O00299 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLIC1O00299 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLIC1O00299 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLIC1O00299 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLIC1O00299 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms