Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 OR10B1P-201ENST00000601666 907 ntBASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 AC005695.3-201ENST00000614522 232 ntBASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 AL359258.3-201ENST00000622910 2331 ntBASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 ZNF767P-206ENST00000513792 565 ntBASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 AL008638.5-201ENST00000623814 1298 ntBASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
NPIPA3F8WFD2 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 AL023775.1-201ENST00000454907 1746 ntBASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 AL157414.3-201ENST00000624276 1954 ntBASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms