Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HMX3A6NHT5 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
HMX3A6NHT5 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.02□□□□□ -0.33
HMX3A6NHT5 FDX1P1-201ENST00000449115 551 ntBASIC13.02□□□□□ -0.33
HMX3A6NHT5 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.02□□□□□ -0.33
HMX3A6NHT5 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.02□□□□□ -0.33
HMX3A6NHT5 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.02□□□□□ -0.33
HMX3A6NHT5 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.02□□□□□ -0.33
HMX3A6NHT5 SLC25A1P1-201ENST00000528351 927 ntBASIC13.02□□□□□ -0.33
HMX3A6NHT5 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.02□□□□□ -0.33
HMX3A6NHT5 KRT19P2-202ENST00000557173 1012 ntBASIC13.02□□□□□ -0.33
HMX3A6NHT5 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.02□□□□□ -0.33
HMX3A6NHT5 AC120114.3-201ENST00000611923 658 ntBASIC13.02□□□□□ -0.33
HMX3A6NHT5 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.02□□□□□ -0.33
HMX3A6NHT5 AL365181.3-201ENST00000605886 3222 ntBASIC13.02□□□□□ -0.33
HMX3A6NHT5 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HMX3A6NHT5 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HMX3A6NHT5 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
HMX3A6NHT5 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HMX3A6NHT5 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HMX3A6NHT5 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
HMX3A6NHT5 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HMX3A6NHT5 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HMX3A6NHT5 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
HMX3A6NHT5 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HMX3A6NHT5 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
HMX3A6NHT5 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.02□□□□□ -0.33
HMX3A6NHT5 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.02□□□□□ -0.33
HMX3A6NHT5 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
HMX3A6NHT5 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HMX3A6NHT5 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HMX3A6NHT5 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HMX3A6NHT5 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HMX3A6NHT5 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.01□□□□□ -0.33
HMX3A6NHT5 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
HMX3A6NHT5 GOLGA2P5-201ENST00000266746 2395 ntBASIC13.01□□□□□ -0.33
HMX3A6NHT5 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HMX3A6NHT5 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HMX3A6NHT5 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.01□□□□□ -0.33
HMX3A6NHT5 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.01□□□□□ -0.33
HMX3A6NHT5 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HMX3A6NHT5 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
HMX3A6NHT5 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HMX3A6NHT5 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HMX3A6NHT5 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HMX3A6NHT5 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
HMX3A6NHT5 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HMX3A6NHT5 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HMX3A6NHT5 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.01□□□□□ -0.33
HMX3A6NHT5 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HMX3A6NHT5 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HMX3A6NHT5 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HMX3A6NHT5 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HMX3A6NHT5 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.01□□□□□ -0.33
HMX3A6NHT5 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HMX3A6NHT5 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.01□□□□□ -0.33
HMX3A6NHT5 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.01□□□□□ -0.33
HMX3A6NHT5 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.01□□□□□ -0.33
HMX3A6NHT5 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HMX3A6NHT5 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.01□□□□□ -0.33
HMX3A6NHT5 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HMX3A6NHT5 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
HMX3A6NHT5 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
HMX3A6NHT5 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
HMX3A6NHT5 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
HMX3A6NHT5 AC020910.6-201ENST00000623084 1459 ntBASIC13.01□□□□□ -0.33
HMX3A6NHT5 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.01□□□□□ -0.33
HMX3A6NHT5 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.01□□□□□ -0.33
HMX3A6NHT5 KHSRPP1-201ENST00000427983 1768 ntBASIC13.01□□□□□ -0.33
HMX3A6NHT5 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.01□□□□□ -0.33
HMX3A6NHT5 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
HMX3A6NHT5 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HMX3A6NHT5 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
HMX3A6NHT5 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HMX3A6NHT5 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HMX3A6NHT5 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
HMX3A6NHT5 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HMX3A6NHT5 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HMX3A6NHT5 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HMX3A6NHT5 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
HMX3A6NHT5 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC13.01□□□□□ -0.33
HMX3A6NHT5 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC13.01□□□□□ -0.33
HMX3A6NHT5 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
HMX3A6NHT5 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC13.01□□□□□ -0.33
HMX3A6NHT5 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.01□□□□□ -0.33
HMX3A6NHT5 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
HMX3A6NHT5 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HMX3A6NHT5 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13□□□□□ -0.33
HMX3A6NHT5 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HMX3A6NHT5 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HMX3A6NHT5 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13□□□□□ -0.33
HMX3A6NHT5 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13□□□□□ -0.33
HMX3A6NHT5 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
HMX3A6NHT5 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HMX3A6NHT5 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
HMX3A6NHT5 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
HMX3A6NHT5 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HMX3A6NHT5 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC13□□□□□ -0.33
HMX3A6NHT5 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
HMX3A6NHT5 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms