Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 AL031719.1-201ENST00000623365 2587 ntBASIC10.5□□□□□ -0.73
LINC01546A6NGU7 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 IGHV3-62-201ENST00000520057 340 ntBASIC10.5□□□□□ -0.73
LINC01546A6NGU7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 SLC25A39P2-201ENST00000537614 270 ntBASIC10.5□□□□□ -0.73
LINC01546A6NGU7 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 AL121912.1-201ENST00000603683 238 ntBASIC10.5□□□□□ -0.73
LINC01546A6NGU7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 AC093458.2-201ENST00000623150 629 ntBASIC10.5□□□□□ -0.73
LINC01546A6NGU7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 AGGF1P10-201ENST00000635005 2191 ntBASIC10.5□□□□□ -0.73
LINC01546A6NGU7 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 AC125807.2-201ENST00000513358 3514 ntBASIC10.49□□□□□ -0.73
LINC01546A6NGU7 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 AL353779.1-201ENST00000434793 351 ntBASIC10.49□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms