Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 AL627223.1-201ENST00000416693 442 ntBASIC13.02□□□□□ -0.33
SHISA3A0PJX4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 CR383656.2-201ENST00000548656 2254 ntBASIC13.02□□□□□ -0.33
SHISA3A0PJX4 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.02□□□□□ -0.33
SHISA3A0PJX4 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 MIR497HG-202ENST00000572453 3838 ntBASIC13.01□□□□□ -0.33
SHISA3A0PJX4 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 MIR574-201ENST00000385209 96 ntBASIC13.01□□□□□ -0.33
SHISA3A0PJX4 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 SERBP1P3-201ENST00000459980 809 ntBASIC13.01□□□□□ -0.33
SHISA3A0PJX4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 AC092364.2-202ENST00000597012 1073 ntBASIC13.01□□□□□ -0.33
SHISA3A0PJX4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
SHISA3A0PJX4 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SHISA3A0PJX4 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
SHISA3A0PJX4 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SHISA3A0PJX4 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SHISA3A0PJX4 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SHISA3A0PJX4 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SHISA3A0PJX4 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13□□□□□ -0.33
SHISA3A0PJX4 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SHISA3A0PJX4 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
SHISA3A0PJX4 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13□□□□□ -0.33
SHISA3A0PJX4 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13□□□□□ -0.33
SHISA3A0PJX4 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SHISA3A0PJX4 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SHISA3A0PJX4 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SHISA3A0PJX4 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13□□□□□ -0.33
SHISA3A0PJX4 CETN4P-206ENST00000642099 2168 ntBASIC13□□□□□ -0.33
SHISA3A0PJX4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
SHISA3A0PJX4 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SHISA3A0PJX4 NCLP1-201ENST00000445357 1963 ntBASIC13□□□□□ -0.33
SHISA3A0PJX4 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13□□□□□ -0.33
SHISA3A0PJX4 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13□□□□□ -0.33
SHISA3A0PJX4 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SHISA3A0PJX4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
SHISA3A0PJX4 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms