Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 HSPA8P5-201ENST00000456928 2069 ntBASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.16□□□□□ -0.3
TRDV1A0A1B0GX56 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
TRDV1A0A1B0GX56 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.31
TRDV1A0A1B0GX56 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
TRDV1A0A1B0GX56 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
TRDV1A0A1B0GX56 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.15□□□□□ -0.31
TRDV1A0A1B0GX56 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 RPL13AP23-201ENST00000480739 586 ntBASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 SLC25A6P4-201ENST00000586535 553 ntBASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 AC072061.1-201ENST00000569710 2234 ntBASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 AGAP10P-201ENST00000454844 2418 ntBASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms