Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 GREM1-201ENST00000560677 623 ntTSL 4 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 CHCHD2P3-201ENST00000603038 451 ntBASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 AC133539.2-201ENST00000604757 467 ntBASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 BX539320.1-201ENST00000623759 877 ntBASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 HSPA7-201ENST00000445535 1927 ntBASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 AL158070.2-201ENST00000623713 1621 ntBASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 KRT8P22-201ENST00000562317 1415 ntBASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 AL360270.3-201ENST00000609118 1348 ntBASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 TKT-201ENST00000296289 1931 ntTSL 5 BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 HNRNPA1P48-201ENST00000562726 1377 ntBASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 HMGN1P19-201ENST00000436976 333 ntBASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 AL359711.2-201ENST00000563105 872 ntBASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 AC008494.3-201ENST00000606615 944 ntBASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 ACE3P-201ENST00000423435 1973 ntBASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC11.33□□□□□ -0.6
HLA-DRB4X5D2U9 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms