Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 CLUHP2-201ENST00000426660 1303 ntBASIC17.03■□□□□ 0.32
CLIC4Q9Y696 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.03■□□□□ 0.32
CLIC4Q9Y696 AC145423.3-201ENST00000615987 467 ntBASIC17.03■□□□□ 0.32
CLIC4Q9Y696 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 CICP16-201ENST00000502609 2813 ntBASIC17.03■□□□□ 0.32
CLIC4Q9Y696 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 MYADML-201ENST00000474610 2147 ntBASIC17.03■□□□□ 0.32
CLIC4Q9Y696 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLIC4Q9Y696 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLIC4Q9Y696 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.02■□□□□ 0.32
CLIC4Q9Y696 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLIC4Q9Y696 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLIC4Q9Y696 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC17.02■□□□□ 0.32
CLIC4Q9Y696 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLIC4Q9Y696 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CLIC4Q9Y696 AC011840.2-201ENST00000563063 1520 ntBASIC17.02■□□□□ 0.32
CLIC4Q9Y696 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLIC4Q9Y696 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CLIC4Q9Y696 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLIC4Q9Y696 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.02■□□□□ 0.32
CLIC4Q9Y696 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLIC4Q9Y696 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.02■□□□□ 0.32
CLIC4Q9Y696 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.02■□□□□ 0.32
CLIC4Q9Y696 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CLIC4Q9Y696 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.02■□□□□ 0.32
CLIC4Q9Y696 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CLIC4Q9Y696 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLIC4Q9Y696 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLIC4Q9Y696 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLIC4Q9Y696 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CLIC4Q9Y696 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLIC4Q9Y696 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CLIC4Q9Y696 AC090505.1-201ENST00000430515 1834 ntBASIC17.02■□□□□ 0.31
CLIC4Q9Y696 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLIC4Q9Y696 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CLIC4Q9Y696 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
CLIC4Q9Y696 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLIC4Q9Y696 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CLIC4Q9Y696 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CLIC4Q9Y696 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLIC4Q9Y696 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLIC4Q9Y696 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLIC4Q9Y696 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.02■□□□□ 0.31
CLIC4Q9Y696 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLIC4Q9Y696 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CLIC4Q9Y696 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.02■□□□□ 0.31
CLIC4Q9Y696 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLIC4Q9Y696 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLIC4Q9Y696 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 POM121L8P-201ENST00000417732 1281 ntBASIC17.01■□□□□ 0.31
CLIC4Q9Y696 POM121L9P-203ENST00000441984 1285 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms