Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 KRT18P13-201ENST00000400056 1290 ntBASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 CICP1-201ENST00000416803 2410 ntBASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 AC007967.2-201ENST00000432613 625 ntBASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRCH1Q9Y2L9 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRCH1Q9Y2L9 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC14.27□□□□□ -0.12
LRCH1Q9Y2L9 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRCH1Q9Y2L9 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.27□□□□□ -0.12
LRCH1Q9Y2L9 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LRCH1Q9Y2L9 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LRCH1Q9Y2L9 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRCH1Q9Y2L9 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRCH1Q9Y2L9 AC073439.1-201ENST00000624121 1774 ntBASIC14.27□□□□□ -0.12
LRCH1Q9Y2L9 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRCH1Q9Y2L9 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRCH1Q9Y2L9 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.27□□□□□ -0.12
LRCH1Q9Y2L9 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LRCH1Q9Y2L9 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LRCH1Q9Y2L9 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRCH1Q9Y2L9 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LRCH1Q9Y2L9 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LRCH1Q9Y2L9 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRCH1Q9Y2L9 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LRCH1Q9Y2L9 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRCH1Q9Y2L9 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.27□□□□□ -0.12
LRCH1Q9Y2L9 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRCH1Q9Y2L9 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRCH1Q9Y2L9 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
LRCH1Q9Y2L9 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
LRCH1Q9Y2L9 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LRCH1Q9Y2L9 BX842568.4-201ENST00000421222 227 ntBASIC14.27□□□□□ -0.13
LRCH1Q9Y2L9 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.27□□□□□ -0.13
LRCH1Q9Y2L9 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
LRCH1Q9Y2L9 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.27□□□□□ -0.13
LRCH1Q9Y2L9 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.27□□□□□ -0.13
LRCH1Q9Y2L9 VN2R19P-201ENST00000442399 1052 ntBASIC14.27□□□□□ -0.13
LRCH1Q9Y2L9 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.27□□□□□ -0.13
LRCH1Q9Y2L9 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.27□□□□□ -0.13
LRCH1Q9Y2L9 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.27□□□□□ -0.13
LRCH1Q9Y2L9 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.27□□□□□ -0.13
LRCH1Q9Y2L9 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LRCH1Q9Y2L9 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
LRCH1Q9Y2L9 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRCH1Q9Y2L9 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRCH1Q9Y2L9 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRCH1Q9Y2L9 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC14.27□□□□□ -0.13
LRCH1Q9Y2L9 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRCH1Q9Y2L9 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRCH1Q9Y2L9 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRCH1Q9Y2L9 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC14.27□□□□□ -0.13
LRCH1Q9Y2L9 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
LRCH1Q9Y2L9 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRCH1Q9Y2L9 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.27□□□□□ -0.13
LRCH1Q9Y2L9 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LRCH1Q9Y2L9 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LRCH1Q9Y2L9 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms