Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NPC1L1Q9UHC9 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NPC1L1Q9UHC9 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC19.76■□□□□ 0.75
NPC1L1Q9UHC9 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NPC1L1Q9UHC9 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NPC1L1Q9UHC9 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NPC1L1Q9UHC9 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC19.76■□□□□ 0.75
NPC1L1Q9UHC9 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
NPC1L1Q9UHC9 AGER-203ENST00000375065 665 ntTSL 2 BASIC19.76■□□□□ 0.75
NPC1L1Q9UHC9 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC19.76■□□□□ 0.75
NPC1L1Q9UHC9 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC19.76■□□□□ 0.75
NPC1L1Q9UHC9 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC19.76■□□□□ 0.75
NPC1L1Q9UHC9 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC19.76■□□□□ 0.75
NPC1L1Q9UHC9 AC084346.2-201ENST00000607097 949 ntBASIC19.76■□□□□ 0.75
NPC1L1Q9UHC9 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC19.76■□□□□ 0.75
NPC1L1Q9UHC9 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
NPC1L1Q9UHC9 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NPC1L1Q9UHC9 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NPC1L1Q9UHC9 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NPC1L1Q9UHC9 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NPC1L1Q9UHC9 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NPC1L1Q9UHC9 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NPC1L1Q9UHC9 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NPC1L1Q9UHC9 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NPC1L1Q9UHC9 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NPC1L1Q9UHC9 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
NPC1L1Q9UHC9 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NPC1L1Q9UHC9 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPC1L1Q9UHC9 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NPC1L1Q9UHC9 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NPC1L1Q9UHC9 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPC1L1Q9UHC9 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPC1L1Q9UHC9 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPC1L1Q9UHC9 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPC1L1Q9UHC9 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
NPC1L1Q9UHC9 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPC1L1Q9UHC9 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPC1L1Q9UHC9 LBH-202ENST00000401506 485 ntTSL 3 BASIC19.75■□□□□ 0.75
NPC1L1Q9UHC9 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC19.75■□□□□ 0.75
NPC1L1Q9UHC9 OARD1-204ENST00000464633 717 ntTSL 2 BASIC19.75■□□□□ 0.75
NPC1L1Q9UHC9 AC099548.2-209ENST00000480264 625 ntBASIC19.75■□□□□ 0.75
NPC1L1Q9UHC9 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC19.75■□□□□ 0.75
NPC1L1Q9UHC9 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC19.75■□□□□ 0.75
NPC1L1Q9UHC9 AC026740.1-201ENST00000607068 791 ntBASIC19.75■□□□□ 0.75
NPC1L1Q9UHC9 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPC1L1Q9UHC9 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPC1L1Q9UHC9 USP4-203ENST00000415188 1454 ntTSL 3 BASIC19.75■□□□□ 0.75
NPC1L1Q9UHC9 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPC1L1Q9UHC9 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPC1L1Q9UHC9 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NPC1L1Q9UHC9 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPC1L1Q9UHC9 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC19.75■□□□□ 0.75
NPC1L1Q9UHC9 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC19.75■□□□□ 0.75
NPC1L1Q9UHC9 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPC1L1Q9UHC9 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 LAP3P2-201ENST00000454686 1454 ntBASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 MIR6787-201ENST00000616675 61 ntBASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC19.74■□□□□ 0.75
NPC1L1Q9UHC9 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms