Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 PRRC2B-202ENST00000357304 11042 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 MPST-204ENST00000404393 1329 ntTSL 5 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 LINC01165-201ENST00000445190 1623 ntBASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 CANX-209ENST00000504734 2232 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 PMEL-204ENST00000548493 2204 ntAPPRIS P3 TSL 2 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 NKTR-201ENST00000232978 7343 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 FN1-212ENST00000446046 7952 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 SEC24B-203ENST00000504968 4066 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 KANSL1-201ENST00000262419 5309 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 TECPR2-201ENST00000359520 8686 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 AL135999.2-201ENST00000622438 1686 ntBASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 GATAD2B-201ENST00000368655 7478 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 HIVEP2-203ENST00000367604 10032 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 NR2E1-201ENST00000368983 2612 ntTSL 2 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 MAST4-203ENST00000403666 7586 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 DCLK3-203ENST00000636136 5446 ntTSL 5 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 GRM4-201ENST00000374177 3590 ntTSL 2 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 PCDHB6-201ENST00000231136 3266 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 SEPT8-210ENST00000448933 4270 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 TMEM164-202ENST00000372068 5566 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 TRAK1-202ENST00000341421 4620 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 DNAH2-203ENST00000572933 14955 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 RCHY1-201ENST00000324439 4686 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 ARHGAP36-202ENST00000370921 2447 ntTSL 2 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 FKBP4-201ENST00000001008 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 NLRC3-201ENST00000324659 3414 ntTSL 5 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 LGALS9-203ENST00000395473 3114 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 AC009108.4-201ENST00000623284 2451 ntBASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 SYS1-201ENST00000243918 2862 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 HDAC7-230ENST00000552960 3216 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 STX16-205ENST00000361830 4318 ntTSL 5 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 MAP3K9-204ENST00000554146 2982 ntTSL 2 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 KLHL30-201ENST00000409223 3726 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 CACNA1C-210ENST00000399606 6571 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 CACNA1C-212ENST00000399621 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 CACNA1C-215ENST00000399637 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 CACNA1C-216ENST00000399638 6595 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 CACNA1C-221ENST00000402845 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 CHRNB1-202ENST00000536404 1623 ntTSL 2 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 LY6E-213ENST00000522528 606 ntTSL 3 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 AC020765.3-201ENST00000613051 740 ntBASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 GOLGA8DP-201ENST00000314246 2786 ntTSL 2 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 BAHD1-202ENST00000560846 4432 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 GAPDHP72-202ENST00000636791 2141 ntTSL 5 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 UQCC1-201ENST00000349714 2188 ntTSL 5 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 CHTF8-201ENST00000306585 2561 ntBASIC7.43□□□□□ -1.22
CDC42SE1Q9NRR8 OR10H5-202ENST00000642092 7044 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms