Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
VTA1Q9NP79 LDHBP1-201ENST00000455730 1119 ntBASIC16.56■□□□□ 0.24
VTA1Q9NP79 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
VTA1Q9NP79 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.56■□□□□ 0.24
VTA1Q9NP79 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.56■□□□□ 0.24
VTA1Q9NP79 MIR3147-201ENST00000577811 66 ntBASIC16.56■□□□□ 0.24
VTA1Q9NP79 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.56■□□□□ 0.24
VTA1Q9NP79 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.56■□□□□ 0.24
VTA1Q9NP79 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
VTA1Q9NP79 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.56■□□□□ 0.24
VTA1Q9NP79 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.56■□□□□ 0.24
VTA1Q9NP79 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC16.56■□□□□ 0.24
VTA1Q9NP79 MIR7845-201ENST00000618396 99 ntBASIC16.56■□□□□ 0.24
VTA1Q9NP79 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.56■□□□□ 0.24
VTA1Q9NP79 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
VTA1Q9NP79 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.56■□□□□ 0.24
VTA1Q9NP79 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VTA1Q9NP79 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
VTA1Q9NP79 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VTA1Q9NP79 AC092135.3-201ENST00000624151 1846 ntBASIC16.56■□□□□ 0.24
VTA1Q9NP79 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VTA1Q9NP79 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
VTA1Q9NP79 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VTA1Q9NP79 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
VTA1Q9NP79 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.56■□□□□ 0.24
VTA1Q9NP79 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VTA1Q9NP79 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
VTA1Q9NP79 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VTA1Q9NP79 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.55■□□□□ 0.24
VTA1Q9NP79 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.55■□□□□ 0.24
VTA1Q9NP79 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VTA1Q9NP79 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VTA1Q9NP79 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VTA1Q9NP79 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VTA1Q9NP79 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VTA1Q9NP79 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
VTA1Q9NP79 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VTA1Q9NP79 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VTA1Q9NP79 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VTA1Q9NP79 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
VTA1Q9NP79 KRT8P28-201ENST00000433288 1390 ntBASIC16.55■□□□□ 0.24
VTA1Q9NP79 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
VTA1Q9NP79 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VTA1Q9NP79 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
VTA1Q9NP79 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
VTA1Q9NP79 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VTA1Q9NP79 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VTA1Q9NP79 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VTA1Q9NP79 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VTA1Q9NP79 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
VTA1Q9NP79 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.55■□□□□ 0.24
VTA1Q9NP79 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.55■□□□□ 0.24
VTA1Q9NP79 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.55■□□□□ 0.24
VTA1Q9NP79 AC073352.2-201ENST00000609385 439 ntBASIC16.55■□□□□ 0.24
VTA1Q9NP79 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
VTA1Q9NP79 LINC01783-202ENST00000614408 828 ntBASIC16.55■□□□□ 0.24
VTA1Q9NP79 BX284668.2-205ENST00000619677 828 ntBASIC16.55■□□□□ 0.24
VTA1Q9NP79 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.55■□□□□ 0.24
VTA1Q9NP79 AC092299.1-201ENST00000632679 757 ntBASIC16.55■□□□□ 0.24
VTA1Q9NP79 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VTA1Q9NP79 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VTA1Q9NP79 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
VTA1Q9NP79 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.55■□□□□ 0.24
VTA1Q9NP79 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
VTA1Q9NP79 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.55■□□□□ 0.24
VTA1Q9NP79 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.55■□□□□ 0.24
VTA1Q9NP79 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
VTA1Q9NP79 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
VTA1Q9NP79 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.55■□□□□ 0.24
VTA1Q9NP79 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VTA1Q9NP79 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VTA1Q9NP79 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
VTA1Q9NP79 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VTA1Q9NP79 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VTA1Q9NP79 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VTA1Q9NP79 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VTA1Q9NP79 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
VTA1Q9NP79 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.54■□□□□ 0.24
VTA1Q9NP79 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VTA1Q9NP79 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
VTA1Q9NP79 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.54■□□□□ 0.24
VTA1Q9NP79 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VTA1Q9NP79 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VTA1Q9NP79 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.54■□□□□ 0.24
VTA1Q9NP79 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
VTA1Q9NP79 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.54■□□□□ 0.24
VTA1Q9NP79 AC092978.1-202ENST00000637590 1327 ntBASIC16.54■□□□□ 0.24
VTA1Q9NP79 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VTA1Q9NP79 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VTA1Q9NP79 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VTA1Q9NP79 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VTA1Q9NP79 TSPY25P-201ENST00000429463 745 ntBASIC16.54■□□□□ 0.24
VTA1Q9NP79 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.54■□□□□ 0.24
VTA1Q9NP79 AC098935.1-201ENST00000446057 611 ntBASIC16.54■□□□□ 0.24
VTA1Q9NP79 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC16.54■□□□□ 0.24
VTA1Q9NP79 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.54■□□□□ 0.24
VTA1Q9NP79 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.54■□□□□ 0.24
VTA1Q9NP79 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.54■□□□□ 0.24
VTA1Q9NP79 IQSEC3P1-201ENST00000538799 536 ntBASIC16.54■□□□□ 0.24
VTA1Q9NP79 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms