Protein–RNA interactions for Protein: Q9H9E3

COG4, Conserved oligomeric Golgi complex subunit 4, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COG4Q9H9E3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COG4Q9H9E3 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COG4Q9H9E3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.12■□□□□ 0.01
COG4Q9H9E3 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
COG4Q9H9E3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COG4Q9H9E3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
COG4Q9H9E3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COG4Q9H9E3 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
COG4Q9H9E3 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COG4Q9H9E3 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COG4Q9H9E3 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.12■□□□□ 0.01
COG4Q9H9E3 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COG4Q9H9E3 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COG4Q9H9E3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.11■□□□□ 0.01
COG4Q9H9E3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
COG4Q9H9E3 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.11■□□□□ 0.01
COG4Q9H9E3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
COG4Q9H9E3 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COG4Q9H9E3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
COG4Q9H9E3 AC136759.1-202ENST00000530858 2194 ntBASIC15.11■□□□□ 0.01
COG4Q9H9E3 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COG4Q9H9E3 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
COG4Q9H9E3 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
COG4Q9H9E3 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.11■□□□□ 0.01
COG4Q9H9E3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COG4Q9H9E3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COG4Q9H9E3 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
COG4Q9H9E3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COG4Q9H9E3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
COG4Q9H9E3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
COG4Q9H9E3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.11■□□□□ 0.01
COG4Q9H9E3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COG4Q9H9E3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COG4Q9H9E3 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.11■□□□□ 0.01
COG4Q9H9E3 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
COG4Q9H9E3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.11■□□□□ 0.01
COG4Q9H9E3 COX5BP8-201ENST00000416911 349 ntBASIC15.11■□□□□ 0.01
COG4Q9H9E3 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
COG4Q9H9E3 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.11■□□□□ 0.01
COG4Q9H9E3 AC004066.1-201ENST00000502488 802 ntBASIC15.11■□□□□ 0.01
COG4Q9H9E3 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.11■□□□□ 0.01
COG4Q9H9E3 AC005225.4-201ENST00000557330 545 ntBASIC15.11■□□□□ 0.01
COG4Q9H9E3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.11■□□□□ 0.01
COG4Q9H9E3 SAMD11P1-201ENST00000571429 661 ntBASIC15.11■□□□□ 0.01
COG4Q9H9E3 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.11■□□□□ 0.01
COG4Q9H9E3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.11■□□□□ 0.01
COG4Q9H9E3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
COG4Q9H9E3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
COG4Q9H9E3 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
COG4Q9H9E3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COG4Q9H9E3 AP001267.2-201ENST00000532619 2086 ntBASIC15.11■□□□□ 0.01
COG4Q9H9E3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COG4Q9H9E3 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COG4Q9H9E3 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
COG4Q9H9E3 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
COG4Q9H9E3 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
COG4Q9H9E3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COG4Q9H9E3 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.11■□□□□ 0.01
COG4Q9H9E3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COG4Q9H9E3 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COG4Q9H9E3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
COG4Q9H9E3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COG4Q9H9E3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COG4Q9H9E3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COG4Q9H9E3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
COG4Q9H9E3 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COG4Q9H9E3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COG4Q9H9E3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
COG4Q9H9E3 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COG4Q9H9E3 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
COG4Q9H9E3 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COG4Q9H9E3 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
COG4Q9H9E3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COG4Q9H9E3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.1■□□□□ 0.01
COG4Q9H9E3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COG4Q9H9E3 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.1■□□□□ 0.01
COG4Q9H9E3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.1■□□□□ 0.01
COG4Q9H9E3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COG4Q9H9E3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
COG4Q9H9E3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
COG4Q9H9E3 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COG4Q9H9E3 AL928921.2-201ENST00000641325 2442 ntBASIC15.1■□□□□ 0.01
COG4Q9H9E3 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
COG4Q9H9E3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
COG4Q9H9E3 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.1■□□□□ 0.01
COG4Q9H9E3 AC104457.1-201ENST00000401024 814 ntBASIC15.1■□□□□ 0.01
COG4Q9H9E3 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.1■□□□□ 0.01
COG4Q9H9E3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.1■□□□□ 0.01
COG4Q9H9E3 AC011495.1-201ENST00000498085 584 ntBASIC15.1■□□□□ 0.01
COG4Q9H9E3 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
COG4Q9H9E3 ENPP7P5-201ENST00000541031 1031 ntBASIC15.1■□□□□ 0.01
COG4Q9H9E3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
COG4Q9H9E3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
COG4Q9H9E3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
COG4Q9H9E3 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.1■□□□□ 0.01
COG4Q9H9E3 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.1■□□□□ 0.01
COG4Q9H9E3 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.1■□□□□ 0.01
COG4Q9H9E3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.1■□□□□ 0.01
COG4Q9H9E3 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.1■□□□□ 0.01
COG4Q9H9E3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms