Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 AC134407.2-201ENST00000625089 1978 ntBASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 AC136604.1-201ENST00000418535 575 ntBASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 KRT18P64-201ENST00000434946 1219 ntBASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 AC133552.6-201ENST00000613406 534 ntBASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAF4Q9BUZ4 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TRAF4Q9BUZ4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
TRAF4Q9BUZ4 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TRAF4Q9BUZ4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAF4Q9BUZ4 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TRAF4Q9BUZ4 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TRAF4Q9BUZ4 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
TRAF4Q9BUZ4 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.46□□□□□ -0.26
TRAF4Q9BUZ4 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAF4Q9BUZ4 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.46□□□□□ -0.26
TRAF4Q9BUZ4 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAF4Q9BUZ4 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 ST20-AS1-201ENST00000560255 4223 ntBASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 AC004945.1-201ENST00000416738 983 ntBASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 KRT223P-202ENST00000449164 1292 ntBASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 RPL13AP25-201ENST00000484130 612 ntBASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 AC119751.2-201ENST00000504529 210 ntBASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 HNRNPUP1-201ENST00000554987 333 ntBASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 AL359711.2-201ENST00000563105 872 ntBASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 AC233724.13-201ENST00000598383 410 ntBASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 COX11-210ENST00000639671 696 ntBASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF4Q9BUZ4 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms