Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 VMA21-202ENST00000370361 693 ntTSL 5 BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 RN7SL399P-201ENST00000471648 279 ntBASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 STOM-203ENST00000538954 1257 ntTSL 5 BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 AC008738.7-201ENST00000609744 511 ntBASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 AC010327.5-201ENST00000586923 3061 ntBASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SHANK2-AS3Q9BTD1 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 AC022616.1-201ENST00000518688 554 ntBASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 CALM1-205ENST00000553542 877 ntTSL 5 BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 AC092364.2-202ENST00000597012 1073 ntBASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 AC004840.1-201ENST00000636359 365 ntBASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 AL603764.1-201ENST00000636452 321 ntBASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 FUK-202ENST00000378912 3925 ntTSL 2 BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms