Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN18Q99952 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN18Q99952 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
PTPN18Q99952 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.27
PTPN18Q99952 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN18Q99952 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN18Q99952 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN18Q99952 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN18Q99952 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN18Q99952 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.77■□□□□ 0.27
PTPN18Q99952 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
PTPN18Q99952 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.77■□□□□ 0.27
PTPN18Q99952 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN18Q99952 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.77■□□□□ 0.27
PTPN18Q99952 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN18Q99952 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.77■□□□□ 0.27
PTPN18Q99952 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN18Q99952 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN18Q99952 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN18Q99952 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN18Q99952 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN18Q99952 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN18Q99952 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN18Q99952 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN18Q99952 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN18Q99952 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN18Q99952 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN18Q99952 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PTPN18Q99952 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PTPN18Q99952 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN18Q99952 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC16.76■□□□□ 0.27
PTPN18Q99952 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PTPN18Q99952 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN18Q99952 RGS5-216ENST00000449680 788 ntTSL 3 BASIC16.76■□□□□ 0.27
PTPN18Q99952 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC16.76■□□□□ 0.27
PTPN18Q99952 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC16.76■□□□□ 0.27
PTPN18Q99952 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC16.76■□□□□ 0.27
PTPN18Q99952 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.76■□□□□ 0.27
PTPN18Q99952 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC16.76■□□□□ 0.27
PTPN18Q99952 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.76■□□□□ 0.27
PTPN18Q99952 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC16.76■□□□□ 0.27
PTPN18Q99952 AC006548.2-201ENST00000605217 529 ntBASIC16.76■□□□□ 0.27
PTPN18Q99952 HMGB1P24-201ENST00000611897 328 ntBASIC16.76■□□□□ 0.27
PTPN18Q99952 PLS3-210ENST00000626746 216 ntTSL 4 BASIC16.76■□□□□ 0.27
PTPN18Q99952 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN18Q99952 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN18Q99952 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN18Q99952 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC16.76■□□□□ 0.27
PTPN18Q99952 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN18Q99952 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN18Q99952 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC16.75■□□□□ 0.27
PTPN18Q99952 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN18Q99952 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN18Q99952 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN18Q99952 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.75■□□□□ 0.27
PTPN18Q99952 CTBP2P8-201ENST00000422584 1330 ntBASIC16.75■□□□□ 0.27
PTPN18Q99952 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN18Q99952 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN18Q99952 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN18Q99952 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.75■□□□□ 0.27
PTPN18Q99952 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN18Q99952 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.75■□□□□ 0.27
PTPN18Q99952 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN18Q99952 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
PTPN18Q99952 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC16.75■□□□□ 0.27
PTPN18Q99952 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PTPN18Q99952 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC16.75■□□□□ 0.27
PTPN18Q99952 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN18Q99952 AC092580.1-201ENST00000433998 658 ntBASIC16.75■□□□□ 0.27
PTPN18Q99952 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC16.75■□□□□ 0.27
PTPN18Q99952 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.75■□□□□ 0.27
PTPN18Q99952 AC244197.1-201ENST00000456494 951 ntBASIC16.75■□□□□ 0.27
PTPN18Q99952 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN18Q99952 TREHP1-201ENST00000531328 465 ntBASIC16.75■□□□□ 0.27
PTPN18Q99952 RN7SL665P-201ENST00000578793 300 ntBASIC16.75■□□□□ 0.27
PTPN18Q99952 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC16.75■□□□□ 0.27
PTPN18Q99952 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC16.75■□□□□ 0.27
PTPN18Q99952 AL139339.2-201ENST00000608063 657 ntBASIC16.75■□□□□ 0.27
PTPN18Q99952 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC16.75■□□□□ 0.27
PTPN18Q99952 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN18Q99952 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN18Q99952 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN18Q99952 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN18Q99952 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN18Q99952 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.75■□□□□ 0.27
PTPN18Q99952 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN18Q99952 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN18Q99952 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN18Q99952 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN18Q99952 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN18Q99952 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN18Q99952 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN18Q99952 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN18Q99952 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PTPN18Q99952 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
PTPN18Q99952 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.75■□□□□ 0.27
PTPN18Q99952 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.75■□□□□ 0.27
PTPN18Q99952 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC16.75■□□□□ 0.27
PTPN18Q99952 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN18Q99952 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms