Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.4□□□□□ -0.42
S1PR3Q99500 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
S1PR3Q99500 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.4□□□□□ -0.42
S1PR3Q99500 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
S1PR3Q99500 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
S1PR3Q99500 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
S1PR3Q99500 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.4□□□□□ -0.42
S1PR3Q99500 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.4□□□□□ -0.42
S1PR3Q99500 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.4□□□□□ -0.42
S1PR3Q99500 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
S1PR3Q99500 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
S1PR3Q99500 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
S1PR3Q99500 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
S1PR3Q99500 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
S1PR3Q99500 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
S1PR3Q99500 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
S1PR3Q99500 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
S1PR3Q99500 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
S1PR3Q99500 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.4□□□□□ -0.42
S1PR3Q99500 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.4□□□□□ -0.42
S1PR3Q99500 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.4□□□□□ -0.42
S1PR3Q99500 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.4□□□□□ -0.42
S1PR3Q99500 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.4□□□□□ -0.42
S1PR3Q99500 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
S1PR3Q99500 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.4□□□□□ -0.42
S1PR3Q99500 POLD4-211ENST00000539074 714 ntTSL 3 BASIC12.4□□□□□ -0.42
S1PR3Q99500 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.4□□□□□ -0.42
S1PR3Q99500 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.4□□□□□ -0.42
S1PR3Q99500 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.4□□□□□ -0.42
S1PR3Q99500 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC12.4□□□□□ -0.42
S1PR3Q99500 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.4□□□□□ -0.42
S1PR3Q99500 BRI3BPP1-201ENST00000594224 787 ntBASIC12.4□□□□□ -0.42
S1PR3Q99500 AC093726.1-201ENST00000608064 963 ntBASIC12.4□□□□□ -0.42
S1PR3Q99500 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.4□□□□□ -0.42
S1PR3Q99500 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC12.4□□□□□ -0.42
S1PR3Q99500 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
S1PR3Q99500 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
S1PR3Q99500 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
S1PR3Q99500 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
S1PR3Q99500 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
S1PR3Q99500 AC113367.3-201ENST00000508316 1912 ntBASIC12.4□□□□□ -0.42
S1PR3Q99500 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
S1PR3Q99500 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.4□□□□□ -0.42
S1PR3Q99500 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
S1PR3Q99500 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
S1PR3Q99500 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.4□□□□□ -0.42
S1PR3Q99500 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
S1PR3Q99500 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
S1PR3Q99500 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
S1PR3Q99500 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
S1PR3Q99500 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.4□□□□□ -0.42
S1PR3Q99500 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.4□□□□□ -0.43
S1PR3Q99500 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
S1PR3Q99500 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
S1PR3Q99500 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.4□□□□□ -0.43
S1PR3Q99500 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
S1PR3Q99500 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
S1PR3Q99500 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.39□□□□□ -0.43
S1PR3Q99500 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
S1PR3Q99500 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
S1PR3Q99500 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
S1PR3Q99500 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.39□□□□□ -0.43
S1PR3Q99500 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.39□□□□□ -0.43
S1PR3Q99500 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
S1PR3Q99500 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
S1PR3Q99500 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
S1PR3Q99500 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.39□□□□□ -0.43
S1PR3Q99500 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
S1PR3Q99500 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
S1PR3Q99500 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
S1PR3Q99500 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
S1PR3Q99500 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.39□□□□□ -0.43
S1PR3Q99500 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
S1PR3Q99500 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
S1PR3Q99500 C1QBPP1-201ENST00000400117 770 ntBASIC12.39□□□□□ -0.43
S1PR3Q99500 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.39□□□□□ -0.43
S1PR3Q99500 AL442647.2-201ENST00000429864 857 ntBASIC12.39□□□□□ -0.43
S1PR3Q99500 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.39□□□□□ -0.43
S1PR3Q99500 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.39□□□□□ -0.43
S1PR3Q99500 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
S1PR3Q99500 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.39□□□□□ -0.43
S1PR3Q99500 AC120045.2-201ENST00000567334 178 ntBASIC12.39□□□□□ -0.43
S1PR3Q99500 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.39□□□□□ -0.43
S1PR3Q99500 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.39□□□□□ -0.43
S1PR3Q99500 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.39□□□□□ -0.43
S1PR3Q99500 AL662799.1-202ENST00000614205 422 ntBASIC12.39□□□□□ -0.43
S1PR3Q99500 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.39□□□□□ -0.43
S1PR3Q99500 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
S1PR3Q99500 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
S1PR3Q99500 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.39□□□□□ -0.43
S1PR3Q99500 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
S1PR3Q99500 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
S1PR3Q99500 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
S1PR3Q99500 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.39□□□□□ -0.43
S1PR3Q99500 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
S1PR3Q99500 AL157414.3-201ENST00000624276 1954 ntBASIC12.39□□□□□ -0.43
S1PR3Q99500 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
S1PR3Q99500 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
S1PR3Q99500 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
S1PR3Q99500 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms