Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FGD4Q96M96 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.84■□□□□ 0.29
FGD4Q96M96 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.84■□□□□ 0.29
FGD4Q96M96 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.84■□□□□ 0.29
FGD4Q96M96 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC16.84■□□□□ 0.29
FGD4Q96M96 AC006335.1-201ENST00000445200 547 ntBASIC16.84■□□□□ 0.29
FGD4Q96M96 MAGEA5-201ENST00000446757 942 ntBASIC16.84■□□□□ 0.29
FGD4Q96M96 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.84■□□□□ 0.29
FGD4Q96M96 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.84■□□□□ 0.29
FGD4Q96M96 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.84■□□□□ 0.29
FGD4Q96M96 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.84■□□□□ 0.29
FGD4Q96M96 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.84■□□□□ 0.29
FGD4Q96M96 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.84■□□□□ 0.29
FGD4Q96M96 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FGD4Q96M96 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FGD4Q96M96 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.84■□□□□ 0.29
FGD4Q96M96 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FGD4Q96M96 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
FGD4Q96M96 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FGD4Q96M96 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.84■□□□□ 0.29
FGD4Q96M96 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FGD4Q96M96 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.84■□□□□ 0.29
FGD4Q96M96 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
FGD4Q96M96 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FGD4Q96M96 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.84■□□□□ 0.29
FGD4Q96M96 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FGD4Q96M96 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FGD4Q96M96 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FGD4Q96M96 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FGD4Q96M96 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FGD4Q96M96 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.84■□□□□ 0.29
FGD4Q96M96 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FGD4Q96M96 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
FGD4Q96M96 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
FGD4Q96M96 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
FGD4Q96M96 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
FGD4Q96M96 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
FGD4Q96M96 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.83■□□□□ 0.29
FGD4Q96M96 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
FGD4Q96M96 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
FGD4Q96M96 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
FGD4Q96M96 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
FGD4Q96M96 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.83■□□□□ 0.28
FGD4Q96M96 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.83■□□□□ 0.28
FGD4Q96M96 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
FGD4Q96M96 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FGD4Q96M96 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FGD4Q96M96 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
FGD4Q96M96 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.83■□□□□ 0.28
FGD4Q96M96 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.83■□□□□ 0.28
FGD4Q96M96 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FGD4Q96M96 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
FGD4Q96M96 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.83■□□□□ 0.28
FGD4Q96M96 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FGD4Q96M96 SALL4P5-201ENST00000419001 1760 ntBASIC16.83■□□□□ 0.28
FGD4Q96M96 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
FGD4Q96M96 AC078875.1-201ENST00000431907 724 ntBASIC16.83■□□□□ 0.28
FGD4Q96M96 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FGD4Q96M96 AC069218.1-201ENST00000435269 762 ntBASIC16.83■□□□□ 0.28
FGD4Q96M96 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.83■□□□□ 0.28
FGD4Q96M96 FTLP1-201ENST00000449155 526 ntBASIC16.83■□□□□ 0.28
FGD4Q96M96 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC16.83■□□□□ 0.28
FGD4Q96M96 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.83■□□□□ 0.28
FGD4Q96M96 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FGD4Q96M96 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
FGD4Q96M96 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FGD4Q96M96 RTN3P1-201ENST00000536295 711 ntBASIC16.83■□□□□ 0.28
FGD4Q96M96 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
FGD4Q96M96 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FGD4Q96M96 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.83■□□□□ 0.28
FGD4Q96M96 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.83■□□□□ 0.28
FGD4Q96M96 CYP4F23P-201ENST00000593402 1579 ntBASIC16.83■□□□□ 0.28
FGD4Q96M96 AC007292.2-201ENST00000593524 1812 ntBASIC16.83■□□□□ 0.28
FGD4Q96M96 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
FGD4Q96M96 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
FGD4Q96M96 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.83■□□□□ 0.28
FGD4Q96M96 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.83■□□□□ 0.28
FGD4Q96M96 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
FGD4Q96M96 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FGD4Q96M96 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.83■□□□□ 0.28
FGD4Q96M96 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FGD4Q96M96 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FGD4Q96M96 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.83■□□□□ 0.28
FGD4Q96M96 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FGD4Q96M96 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.82■□□□□ 0.28
FGD4Q96M96 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
FGD4Q96M96 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.82■□□□□ 0.28
FGD4Q96M96 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FGD4Q96M96 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FGD4Q96M96 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
FGD4Q96M96 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FGD4Q96M96 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FGD4Q96M96 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FGD4Q96M96 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
FGD4Q96M96 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.82■□□□□ 0.28
FGD4Q96M96 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FGD4Q96M96 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
FGD4Q96M96 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FGD4Q96M96 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
FGD4Q96M96 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 199.9 ms