Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM11Q96F44 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM11Q96F44 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM11Q96F44 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM11Q96F44 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM11Q96F44 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM11Q96F44 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.82■□□□□ 0.12
TRIM11Q96F44 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRIM11Q96F44 SPCS2P1-201ENST00000561636 679 ntBASIC15.82■□□□□ 0.12
TRIM11Q96F44 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.82■□□□□ 0.12
TRIM11Q96F44 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.82■□□□□ 0.12
TRIM11Q96F44 RN7SL204P-201ENST00000582831 262 ntBASIC15.82■□□□□ 0.12
TRIM11Q96F44 CTBP2P3-201ENST00000585629 1255 ntBASIC15.82■□□□□ 0.12
TRIM11Q96F44 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
TRIM11Q96F44 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
TRIM11Q96F44 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM11Q96F44 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM11Q96F44 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM11Q96F44 AL136172.1-201ENST00000598590 1394 ntBASIC15.82■□□□□ 0.12
TRIM11Q96F44 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM11Q96F44 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRIM11Q96F44 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM11Q96F44 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM11Q96F44 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM11Q96F44 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM11Q96F44 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM11Q96F44 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRIM11Q96F44 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
TRIM11Q96F44 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM11Q96F44 AC152010.1-201ENST00000415779 2006 ntBASIC15.82■□□□□ 0.12
TRIM11Q96F44 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM11Q96F44 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRIM11Q96F44 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM11Q96F44 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRIM11Q96F44 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM11Q96F44 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM11Q96F44 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM11Q96F44 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TRIM11Q96F44 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM11Q96F44 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM11Q96F44 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM11Q96F44 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM11Q96F44 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM11Q96F44 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM11Q96F44 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM11Q96F44 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM11Q96F44 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM11Q96F44 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM11Q96F44 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM11Q96F44 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM11Q96F44 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM11Q96F44 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM11Q96F44 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM11Q96F44 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM11Q96F44 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM11Q96F44 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TRIM11Q96F44 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM11Q96F44 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM11Q96F44 AL138725.1-201ENST00000407347 1314 ntBASIC15.81■□□□□ 0.12
TRIM11Q96F44 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM11Q96F44 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.81■□□□□ 0.12
TRIM11Q96F44 AC002472.2-201ENST00000442739 958 ntBASIC15.81■□□□□ 0.12
TRIM11Q96F44 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM11Q96F44 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TRIM11Q96F44 AC093433.1-201ENST00000458048 571 ntBASIC15.81■□□□□ 0.12
TRIM11Q96F44 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM11Q96F44 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM11Q96F44 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM11Q96F44 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.81■□□□□ 0.12
TRIM11Q96F44 AC131206.1-201ENST00000538078 1211 ntBASIC15.81■□□□□ 0.12
TRIM11Q96F44 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM11Q96F44 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.81■□□□□ 0.12
TRIM11Q96F44 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM11Q96F44 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TRIM11Q96F44 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TRIM11Q96F44 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM11Q96F44 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM11Q96F44 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM11Q96F44 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM11Q96F44 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
TRIM11Q96F44 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM11Q96F44 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM11Q96F44 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM11Q96F44 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM11Q96F44 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM11Q96F44 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM11Q96F44 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM11Q96F44 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM11Q96F44 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM11Q96F44 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM11Q96F44 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM11Q96F44 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TRIM11Q96F44 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM11Q96F44 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM11Q96F44 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM11Q96F44 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM11Q96F44 MRPL37P1-201ENST00000592451 1337 ntBASIC15.8■□□□□ 0.12
TRIM11Q96F44 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM11Q96F44 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM11Q96F44 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms