Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 AL365209.1-201ENST00000624418 6473 ntBASIC15□□□□□ -0.01
SLC44A1Q8WWI5 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15□□□□□ -0.01
SLC44A1Q8WWI5 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 AC130686.1-201ENST00000622936 2466 ntBASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 TLE1P1-201ENST00000422965 589 ntBASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 RPL13AP25-201ENST00000484130 612 ntBASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 AC022616.1-201ENST00000518688 554 ntBASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 AC135586.1-201ENST00000539323 574 ntBASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 AC008738.7-201ENST00000609744 511 ntBASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC44A1Q8WWI5 SBF1P1-201ENST00000444527 5631 ntBASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 SALL4P5-201ENST00000419001 1760 ntBASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 AC003102.2-201ENST00000589195 1469 ntBASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.98□□□□□ -0.01
SLC44A1Q8WWI5 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms