Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 AL031284.1-201ENST00000419297 478 ntBASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 IGHV3-62-201ENST00000520057 340 ntBASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 ADH5P3-201ENST00000433842 1137 ntBASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 AC004066.1-201ENST00000502488 802 ntBASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 AC084121.4-201ENST00000641598 221 ntBASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 AF228730.8-201ENST00000642140 221 ntBASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 HSPA8P5-201ENST00000456928 2069 ntBASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM4Q8WVI0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 MIR497HG-202ENST00000572453 3838 ntBASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM4Q8WVI0 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms