Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 AC119751.2-201ENST00000504529 210 ntBASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 MIR6752-201ENST00000618442 71 ntBASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 OS9-204ENST00000389146 2091 ntTSL 2 BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.48■□□□□ 0.39
SMARCC2Q8TAQ2 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 KRT90P-201ENST00000549264 1064 ntBASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMARCC2Q8TAQ2 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 AL138709.1-201ENST00000614840 1693 ntBASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 TLE1P1-201ENST00000422965 589 ntBASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 AP000812.2-201ENST00000538934 718 ntBASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms