Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.42□□□□□ -0.1
CLHC1Q8NHS4 MIR8072-201ENST00000614241 80 ntBASIC14.42□□□□□ -0.1
CLHC1Q8NHS4 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.42□□□□□ -0.1
CLHC1Q8NHS4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.42□□□□□ -0.1
CLHC1Q8NHS4 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLHC1Q8NHS4 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLHC1Q8NHS4 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.42□□□□□ -0.1
CLHC1Q8NHS4 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.42□□□□□ -0.1
CLHC1Q8NHS4 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLHC1Q8NHS4 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.42□□□□□ -0.1
CLHC1Q8NHS4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.42□□□□□ -0.1
CLHC1Q8NHS4 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLHC1Q8NHS4 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.42□□□□□ -0.1
CLHC1Q8NHS4 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.42□□□□□ -0.1
CLHC1Q8NHS4 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 KRT8P14-201ENST00000414254 1442 ntBASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 AC015802.1-201ENST00000588104 1449 ntBASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 AC022447.6-201ENST00000515522 438 ntBASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 INTS4P2-202ENST00000614726 2019 ntBASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLHC1Q8NHS4 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 AP001582.1-201ENST00000525856 295 ntBASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 AC120045.2-201ENST00000567334 178 ntBASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 BRI3BPP1-201ENST00000594224 787 ntBASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 BX539320.1-201ENST00000623759 877 ntBASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms