Protein–RNA interactions for Protein: Q8NF99

ZNF397, Zinc finger protein 397, humanhuman

Predicted RBP Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397Q8NF99 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF397Q8NF99 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.64■□□□□ 0.25
ZNF397Q8NF99 AL390955.2-201ENST00000603032 514 ntBASIC16.64■□□□□ 0.25
ZNF397Q8NF99 AC074044.1-201ENST00000609673 707 ntBASIC16.64■□□□□ 0.25
ZNF397Q8NF99 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
ZNF397Q8NF99 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF397Q8NF99 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF397Q8NF99 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF397Q8NF99 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF397Q8NF99 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF397Q8NF99 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC16.64■□□□□ 0.25
ZNF397Q8NF99 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF397Q8NF99 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF397Q8NF99 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.64■□□□□ 0.25
ZNF397Q8NF99 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF397Q8NF99 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF397Q8NF99 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF397Q8NF99 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF397Q8NF99 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF397Q8NF99 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF397Q8NF99 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 AC241585.1-201ENST00000433527 519 ntBASIC16.63■□□□□ 0.25
ZNF397Q8NF99 RN7SL618P-201ENST00000477850 296 ntBASIC16.63■□□□□ 0.25
ZNF397Q8NF99 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 AC106028.4-201ENST00000614509 607 ntBASIC16.63■□□□□ 0.25
ZNF397Q8NF99 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
ZNF397Q8NF99 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ZNF397Q8NF99 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
ZNF397Q8NF99 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF397Q8NF99 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF397Q8NF99 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.62■□□□□ 0.25
ZNF397Q8NF99 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC16.62■□□□□ 0.25
ZNF397Q8NF99 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.62■□□□□ 0.25
ZNF397Q8NF99 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF397Q8NF99 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF397Q8NF99 HAL-202ENST00000538703 2637 ntTSL 2 BASIC16.62■□□□□ 0.25
ZNF397Q8NF99 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ZNF397Q8NF99 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF397Q8NF99 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF397Q8NF99 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF397Q8NF99 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF397Q8NF99 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.62■□□□□ 0.25
ZNF397Q8NF99 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.62■□□□□ 0.25
ZNF397Q8NF99 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.62■□□□□ 0.25
ZNF397Q8NF99 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.62■□□□□ 0.25
ZNF397Q8NF99 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.62■□□□□ 0.25
ZNF397Q8NF99 CYMP-203ENST00000474680 1263 ntBASIC16.62■□□□□ 0.25
ZNF397Q8NF99 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.62■□□□□ 0.25
ZNF397Q8NF99 LINC01115-203ENST00000606068 577 ntBASIC16.62■□□□□ 0.25
ZNF397Q8NF99 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.62■□□□□ 0.25
ZNF397Q8NF99 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF397Q8NF99 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ZNF397Q8NF99 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF397Q8NF99 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ZNF397Q8NF99 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.62■□□□□ 0.25
ZNF397Q8NF99 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms