Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 AC140878.1-201ENST00000565277 250 ntBASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
DNAAF1Q8NEP3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 AC089987.1-201ENST00000551654 2209 ntBASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 DNAJB3-202ENST00000449667 1266 ntBASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 KLF2P3-201ENST00000451977 1087 ntBASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 AC125807.1-201ENST00000483097 614 ntBASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 AC067863.1-201ENST00000494933 530 ntBASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 AC000095.1-201ENST00000603208 874 ntBASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 LINC01115-203ENST00000606068 577 ntBASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 AL596442.2-201ENST00000610240 980 ntBASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 Z92544.3-201ENST00000624747 417 ntBASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 PEG13-201ENST00000631594 5667 ntBASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
DNAAF1Q8NEP3 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms