Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 AC131902.2-201ENST00000566892 2172 ntBASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 AC015802.1-201ENST00000588104 1449 ntBASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 ACTBP8-201ENST00000403258 1108 ntBASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 API5-211ENST00000534695 560 ntTSL 5 BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 LINC02560-201ENST00000596379 459 ntBASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 AC005252.2-201ENST00000624630 1141 ntBASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 AC055811.4-201ENST00000624039 1754 ntBASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 AC126755.1-201ENST00000525846 6405 ntBASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 AP001267.2-201ENST00000532619 2086 ntBASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
LSMEM1Q8N8F7 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 ELK1P1-201ENST00000485699 580 ntBASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 AC026434.2-201ENST00000506094 1078 ntBASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 AP001063.1-201ENST00000568332 529 ntBASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 AL354702.1-201ENST00000442006 1960 ntBASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LSMEM1Q8N8F7 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms