Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC22.94■■□□□ 1.26
VPS8Q8N3P4 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
VPS8Q8N3P4 AC116345.2-201ENST00000512837 523 ntBASIC22.94■■□□□ 1.26
VPS8Q8N3P4 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC22.94■■□□□ 1.26
VPS8Q8N3P4 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC22.94■■□□□ 1.26
VPS8Q8N3P4 AC124068.2-201ENST00000569473 1109 ntBASIC22.94■■□□□ 1.26
VPS8Q8N3P4 KLK3-207ENST00000595952 969 ntTSL 3 BASIC22.94■■□□□ 1.26
VPS8Q8N3P4 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC22.94■■□□□ 1.26
VPS8Q8N3P4 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC22.94■■□□□ 1.26
VPS8Q8N3P4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
VPS8Q8N3P4 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC22.94■■□□□ 1.26
VPS8Q8N3P4 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC22.94■■□□□ 1.26
VPS8Q8N3P4 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
VPS8Q8N3P4 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
VPS8Q8N3P4 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
VPS8Q8N3P4 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
VPS8Q8N3P4 WARS-203ENST00000358655 2466 ntTSL 2 BASIC22.94■■□□□ 1.26
VPS8Q8N3P4 LINC00552-201ENST00000625151 2579 ntBASIC22.94■■□□□ 1.26
VPS8Q8N3P4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
VPS8Q8N3P4 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC22.93■■□□□ 1.26
VPS8Q8N3P4 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
VPS8Q8N3P4 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
VPS8Q8N3P4 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC22.93■■□□□ 1.26
VPS8Q8N3P4 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
VPS8Q8N3P4 AL161670.2-201ENST00000557650 1227 ntBASIC22.93■■□□□ 1.26
VPS8Q8N3P4 AC105129.2-201ENST00000559536 390 ntBASIC22.93■■□□□ 1.26
VPS8Q8N3P4 RAN-210ENST00000541630 1475 ntTSL 2 BASIC22.93■■□□□ 1.26
VPS8Q8N3P4 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC22.93■■□□□ 1.26
VPS8Q8N3P4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
VPS8Q8N3P4 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
VPS8Q8N3P4 GSN-209ENST00000449733 2702 ntTSL 2 BASIC22.93■■□□□ 1.26
VPS8Q8N3P4 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
VPS8Q8N3P4 MYB-201ENST00000316528 3571 ntTSL 5 BASIC22.93■■□□□ 1.26
VPS8Q8N3P4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
VPS8Q8N3P4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
VPS8Q8N3P4 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC22.93■■□□□ 1.26
VPS8Q8N3P4 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC22.92■■□□□ 1.26
VPS8Q8N3P4 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
VPS8Q8N3P4 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
VPS8Q8N3P4 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
VPS8Q8N3P4 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC22.92■■□□□ 1.26
VPS8Q8N3P4 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC22.92■■□□□ 1.26
VPS8Q8N3P4 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
VPS8Q8N3P4 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
VPS8Q8N3P4 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC22.92■■□□□ 1.26
VPS8Q8N3P4 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC22.92■■□□□ 1.26
VPS8Q8N3P4 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC22.92■■□□□ 1.26
VPS8Q8N3P4 AC011498.7-201ENST00000624986 2027 ntBASIC22.92■■□□□ 1.26
VPS8Q8N3P4 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
VPS8Q8N3P4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
VPS8Q8N3P4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
VPS8Q8N3P4 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
VPS8Q8N3P4 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC22.92■■□□□ 1.26
VPS8Q8N3P4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC22.92■■□□□ 1.26
VPS8Q8N3P4 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC22.92■■□□□ 1.26
VPS8Q8N3P4 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
VPS8Q8N3P4 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
VPS8Q8N3P4 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC22.92■■□□□ 1.26
VPS8Q8N3P4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
VPS8Q8N3P4 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
VPS8Q8N3P4 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC22.91■■□□□ 1.26
VPS8Q8N3P4 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
VPS8Q8N3P4 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC22.91■■□□□ 1.26
VPS8Q8N3P4 MIR769-201ENST00000390225 118 ntBASIC22.91■■□□□ 1.26
VPS8Q8N3P4 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC22.91■■□□□ 1.26
VPS8Q8N3P4 AC092580.1-201ENST00000433998 658 ntBASIC22.91■■□□□ 1.26
VPS8Q8N3P4 NUP210P1-202ENST00000504322 710 ntBASIC22.91■■□□□ 1.26
VPS8Q8N3P4 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC22.91■■□□□ 1.26
VPS8Q8N3P4 MIR4754-201ENST00000582477 89 ntBASIC22.91■■□□□ 1.26
VPS8Q8N3P4 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
VPS8Q8N3P4 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
VPS8Q8N3P4 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC22.91■■□□□ 1.26
VPS8Q8N3P4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
VPS8Q8N3P4 AL157791.1-201ENST00000553667 1699 ntBASIC22.91■■□□□ 1.26
VPS8Q8N3P4 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC22.91■■□□□ 1.26
VPS8Q8N3P4 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
VPS8Q8N3P4 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
VPS8Q8N3P4 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC22.91■■□□□ 1.26
VPS8Q8N3P4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC22.91■■□□□ 1.26
VPS8Q8N3P4 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
VPS8Q8N3P4 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC22.91■■□□□ 1.26
VPS8Q8N3P4 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
VPS8Q8N3P4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
VPS8Q8N3P4 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
VPS8Q8N3P4 RN7SL832P-201ENST00000607781 1756 ntBASIC22.91■■□□□ 1.26
VPS8Q8N3P4 RNA5SP359-201ENST00000364838 113 ntBASIC22.91■■□□□ 1.26
VPS8Q8N3P4 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
VPS8Q8N3P4 CMC1-204ENST00000423894 549 ntTSL 2 BASIC22.91■■□□□ 1.26
VPS8Q8N3P4 AC073150.1-201ENST00000450406 1084 ntBASIC22.91■■□□□ 1.26
VPS8Q8N3P4 CCNC-217ENST00000523985 958 ntTSL 2 BASIC22.91■■□□□ 1.26
VPS8Q8N3P4 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC22.91■■□□□ 1.26
VPS8Q8N3P4 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC22.91■■□□□ 1.26
VPS8Q8N3P4 AC097724.1-201ENST00000609581 426 ntBASIC22.91■■□□□ 1.26
VPS8Q8N3P4 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC22.91■■□□□ 1.26
VPS8Q8N3P4 AC090386.2-201ENST00000623010 1039 ntBASIC22.91■■□□□ 1.26
VPS8Q8N3P4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
VPS8Q8N3P4 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC22.9■■□□□ 1.26
VPS8Q8N3P4 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
VPS8Q8N3P4 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
VPS8Q8N3P4 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms