Protein–RNA interactions for Protein: Q8IYB3

SRRM1, Serine/arginine repetitive matrix protein 1, humanhuman

Known RBP Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1Q8IYB3 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 AC109322.1-201ENST00000524499 1264 ntBASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 AC003101.2-201ENST00000612557 442 ntBASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 C8orf49-201ENST00000525043 1968 ntBASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM1Q8IYB3 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 AC018665.1-201ENST00000622927 1362 ntBASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 MTND6P24-201ENST00000440466 518 ntBASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 RN7SL828P-201ENST00000607615 303 ntBASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
SRRM1Q8IYB3 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.27■□□□□ 0.04
SRRM1Q8IYB3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.27■□□□□ 0.04
SRRM1Q8IYB3 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.27■□□□□ 0.04
SRRM1Q8IYB3 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SRRM1Q8IYB3 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SRRM1Q8IYB3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
SRRM1Q8IYB3 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM1Q8IYB3 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM1Q8IYB3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM1Q8IYB3 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SRRM1Q8IYB3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM1Q8IYB3 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM1Q8IYB3 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.27■□□□□ 0.04
SRRM1Q8IYB3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM1Q8IYB3 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM1Q8IYB3 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM1Q8IYB3 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
SRRM1Q8IYB3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM1Q8IYB3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM1Q8IYB3 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SRRM1Q8IYB3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM1Q8IYB3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM1Q8IYB3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SRRM1Q8IYB3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SRRM1Q8IYB3 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.27■□□□□ 0.04
SRRM1Q8IYB3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms