Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF44Q7L0R7 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF44Q7L0R7 AL138725.1-201ENST00000407347 1314 ntBASIC14.36□□□□□ -0.11
RNF44Q7L0R7 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF44Q7L0R7 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF44Q7L0R7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF44Q7L0R7 LINC00528-201ENST00000600723 2160 ntBASIC14.36□□□□□ -0.11
RNF44Q7L0R7 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNF44Q7L0R7 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RNF44Q7L0R7 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF44Q7L0R7 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNF44Q7L0R7 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF44Q7L0R7 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.36□□□□□ -0.11
RNF44Q7L0R7 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF44Q7L0R7 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNF44Q7L0R7 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNF44Q7L0R7 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 RN7SKP230-201ENST00000365642 335 ntBASIC14.35□□□□□ -0.11
RNF44Q7L0R7 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 CNN2P10-201ENST00000443067 918 ntBASIC14.35□□□□□ -0.11
RNF44Q7L0R7 COX5BP1-201ENST00000507622 393 ntBASIC14.35□□□□□ -0.11
RNF44Q7L0R7 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 RN7SL713P-201ENST00000582127 302 ntBASIC14.35□□□□□ -0.11
RNF44Q7L0R7 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF44Q7L0R7 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF44Q7L0R7 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF44Q7L0R7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF44Q7L0R7 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF44Q7L0R7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF44Q7L0R7 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF44Q7L0R7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF44Q7L0R7 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF44Q7L0R7 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF44Q7L0R7 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF44Q7L0R7 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF44Q7L0R7 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF44Q7L0R7 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RNF44Q7L0R7 AC003102.2-201ENST00000589195 1469 ntBASIC14.34□□□□□ -0.11
RNF44Q7L0R7 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF44Q7L0R7 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF44Q7L0R7 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF44Q7L0R7 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF44Q7L0R7 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RNF44Q7L0R7 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF44Q7L0R7 AC007969.1-201ENST00000433675 447 ntBASIC14.34□□□□□ -0.11
RNF44Q7L0R7 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.34□□□□□ -0.11
RNF44Q7L0R7 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.34□□□□□ -0.11
RNF44Q7L0R7 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF44Q7L0R7 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.34□□□□□ -0.11
RNF44Q7L0R7 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.34□□□□□ -0.11
RNF44Q7L0R7 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.34□□□□□ -0.11
RNF44Q7L0R7 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.34□□□□□ -0.11
RNF44Q7L0R7 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF44Q7L0R7 AC073413.1-201ENST00000603927 732 ntBASIC14.34□□□□□ -0.11
RNF44Q7L0R7 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms