Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 OR2I1P-210ENST00000642037 4691 ntBASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 RN7SKP230-201ENST00000365642 335 ntBASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 TLE1P1-201ENST00000422965 589 ntBASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 AC091804.1-201ENST00000486888 567 ntBASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 AC126915.1-201ENST00000522847 1038 ntBASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
H3F3CQ6NXT2 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
H3F3CQ6NXT2 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.83□□□□□ -0.19
H3F3CQ6NXT2 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
H3F3CQ6NXT2 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
H3F3CQ6NXT2 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
H3F3CQ6NXT2 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.83□□□□□ -0.19
H3F3CQ6NXT2 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.83□□□□□ -0.19
H3F3CQ6NXT2 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
H3F3CQ6NXT2 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
H3F3CQ6NXT2 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
H3F3CQ6NXT2 AC013268.4-201ENST00000637413 2228 ntBASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 INE2-201ENST00000630399 1874 ntBASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 AL358472.3-201ENST00000608147 415 ntBASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 AL139099.5-201ENST00000635274 300 ntBASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms