Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
DCAF4L1Q3SXM0 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.08■□□□□ 0.17
DCAF4L1Q3SXM0 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
DCAF4L1Q3SXM0 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 DPM3-202ENST00000368399 517 ntBASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 CALR4P-201ENST00000431943 946 ntBASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 NKAIN1P1-201ENST00000435754 582 ntBASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 BX284668.4-201ENST00000453917 508 ntBASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 AC013355.1-201ENST00000562625 723 ntBASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 AC009884.2-201ENST00000603110 324 ntBASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 MIR6720-201ENST00000611664 98 ntBASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 AC004899.1-201ENST00000424687 1714 ntBASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
DCAF4L1Q3SXM0 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 EIF4HP1-201ENST00000453115 687 ntBASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 AP000346.4-201ENST00000614827 381 ntBASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 AL136295.7-201ENST00000619226 1200 ntBASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 AL139099.5-201ENST00000635274 300 ntBASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 AL008718.2-201ENST00000609206 1313 ntBASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DCAF4L1Q3SXM0 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms