Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 AL139400.1-201ENST00000366220 510 ntBASIC13.32□□□□□ -0.28
ODF4Q2M2E3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 KLF2P3-201ENST00000451977 1087 ntBASIC13.32□□□□□ -0.28
ODF4Q2M2E3 AC004967.1-201ENST00000453589 447 ntBASIC13.32□□□□□ -0.28
ODF4Q2M2E3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 HLA-J-203ENST00000494367 1087 ntBASIC13.32□□□□□ -0.28
ODF4Q2M2E3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 AC004461.2-201ENST00000629517 803 ntBASIC13.32□□□□□ -0.28
ODF4Q2M2E3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 HSPA7-201ENST00000445535 1927 ntBASIC13.32□□□□□ -0.28
ODF4Q2M2E3 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 MEX3B-202ENST00000558133 4333 ntBASIC13.32□□□□□ -0.28
ODF4Q2M2E3 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ODF4Q2M2E3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 AP006288.1-201ENST00000446065 395 ntBASIC13.31□□□□□ -0.28
ODF4Q2M2E3 DNAJB3-202ENST00000449667 1266 ntBASIC13.31□□□□□ -0.28
ODF4Q2M2E3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
ODF4Q2M2E3 AC136759.1-202ENST00000530858 2194 ntBASIC13.31□□□□□ -0.28
ODF4Q2M2E3 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms