Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 MEG3_2.1-201ENST00000611456 105 ntBASIC17.7■□□□□ 0.42
PDS5AQ29RF7 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC17.7■□□□□ 0.42
PDS5AQ29RF7 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 AC116345.2-201ENST00000512837 523 ntBASIC17.69■□□□□ 0.42
PDS5AQ29RF7 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDS5AQ29RF7 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 AC006504.5-208ENST00000588784 2401 ntBASIC17.68■□□□□ 0.42
PDS5AQ29RF7 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 NCR3-202ENST00000376071 541 ntTSL 5 BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 AC073150.1-201ENST00000450406 1084 ntBASIC17.68■□□□□ 0.42
PDS5AQ29RF7 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 PGAM1P5-201ENST00000548011 764 ntBASIC17.68■□□□□ 0.42
PDS5AQ29RF7 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 HPN-206ENST00000597419 1212 ntTSL 5 BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 RAN-210ENST00000541630 1475 ntTSL 2 BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.68■□□□□ 0.42
PDS5AQ29RF7 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDS5AQ29RF7 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.67■□□□□ 0.42
PDS5AQ29RF7 DBET-201ENST00000630918 3363 ntBASIC17.67■□□□□ 0.42
PDS5AQ29RF7 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms