Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.41□□□□□ -0.26
SCN1BQ07699 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.41□□□□□ -0.26
SCN1BQ07699 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SCN1BQ07699 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
SCN1BQ07699 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
SCN1BQ07699 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SCN1BQ07699 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SCN1BQ07699 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SCN1BQ07699 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SCN1BQ07699 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
SCN1BQ07699 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SCN1BQ07699 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.41□□□□□ -0.26
SCN1BQ07699 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.41□□□□□ -0.26
SCN1BQ07699 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.41□□□□□ -0.26
SCN1BQ07699 PHKG1P2-201ENST00000457537 863 ntBASIC13.41□□□□□ -0.26
SCN1BQ07699 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.41□□□□□ -0.26
SCN1BQ07699 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.41□□□□□ -0.26
SCN1BQ07699 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.41□□□□□ -0.26
SCN1BQ07699 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SCN1BQ07699 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.41□□□□□ -0.26
SCN1BQ07699 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.41□□□□□ -0.26
SCN1BQ07699 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.41□□□□□ -0.26
SCN1BQ07699 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SCN1BQ07699 AC010327.4-202ENST00000591484 748 ntBASIC13.41□□□□□ -0.26
SCN1BQ07699 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.41□□□□□ -0.26
SCN1BQ07699 AC022145.2-201ENST00000598203 171 ntBASIC13.41□□□□□ -0.26
SCN1BQ07699 AL671883.3-201ENST00000603274 991 ntBASIC13.41□□□□□ -0.26
SCN1BQ07699 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.41□□□□□ -0.26
SCN1BQ07699 AC055717.3-201ENST00000622967 595 ntBASIC13.41□□□□□ -0.26
SCN1BQ07699 AC105339.1-204ENST00000636249 355 ntBASIC13.41□□□□□ -0.26
SCN1BQ07699 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.41□□□□□ -0.26
SCN1BQ07699 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SCN1BQ07699 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SCN1BQ07699 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SCN1BQ07699 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SCN1BQ07699 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
SCN1BQ07699 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SCN1BQ07699 AC019294.4-201ENST00000561777 2905 ntBASIC13.41□□□□□ -0.26
SCN1BQ07699 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SCN1BQ07699 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SCN1BQ07699 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SCN1BQ07699 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SCN1BQ07699 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.41□□□□□ -0.26
SCN1BQ07699 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SCN1BQ07699 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SCN1BQ07699 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SCN1BQ07699 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
SCN1BQ07699 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SCN1BQ07699 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SCN1BQ07699 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SCN1BQ07699 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SCN1BQ07699 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
SCN1BQ07699 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCN1BQ07699 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SCN1BQ07699 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCN1BQ07699 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCN1BQ07699 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCN1BQ07699 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
SCN1BQ07699 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SCN1BQ07699 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SCN1BQ07699 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
SCN1BQ07699 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SCN1BQ07699 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCN1BQ07699 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCN1BQ07699 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SCN1BQ07699 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.4□□□□□ -0.26
SCN1BQ07699 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCN1BQ07699 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
SCN1BQ07699 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.4□□□□□ -0.26
SCN1BQ07699 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SCN1BQ07699 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCN1BQ07699 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.4□□□□□ -0.26
SCN1BQ07699 AL353705.2-201ENST00000428243 662 ntBASIC13.4□□□□□ -0.26
SCN1BQ07699 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.4□□□□□ -0.26
SCN1BQ07699 ALG1L8P-201ENST00000533887 760 ntBASIC13.4□□□□□ -0.26
SCN1BQ07699 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.4□□□□□ -0.26
SCN1BQ07699 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.4□□□□□ -0.26
SCN1BQ07699 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.4□□□□□ -0.26
SCN1BQ07699 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCN1BQ07699 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCN1BQ07699 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SCN1BQ07699 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCN1BQ07699 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCN1BQ07699 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.4□□□□□ -0.26
SCN1BQ07699 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCN1BQ07699 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCN1BQ07699 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
SCN1BQ07699 AC016397.2-201ENST00000624848 1985 ntBASIC13.4□□□□□ -0.27
SCN1BQ07699 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.4□□□□□ -0.27
SCN1BQ07699 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.39□□□□□ -0.27
SCN1BQ07699 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SCN1BQ07699 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SCN1BQ07699 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.39□□□□□ -0.27
SCN1BQ07699 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.39□□□□□ -0.27
SCN1BQ07699 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SCN1BQ07699 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SCN1BQ07699 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SCN1BQ07699 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SCN1BQ07699 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.39□□□□□ -0.27
SCN1BQ07699 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms