Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IRX4P78413 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
IRX4P78413 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.66■□□□□ 0.1
IRX4P78413 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IRX4P78413 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
IRX4P78413 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
IRX4P78413 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.66■□□□□ 0.1
IRX4P78413 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IRX4P78413 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.66■□□□□ 0.1
IRX4P78413 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.66■□□□□ 0.1
IRX4P78413 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IRX4P78413 BAATP1-201ENST00000412284 1225 ntBASIC15.66■□□□□ 0.1
IRX4P78413 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.66■□□□□ 0.1
IRX4P78413 AC026954.1-201ENST00000429771 1293 ntBASIC15.66■□□□□ 0.1
IRX4P78413 AC016694.1-201ENST00000434179 700 ntBASIC15.66■□□□□ 0.1
IRX4P78413 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
IRX4P78413 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.66■□□□□ 0.1
IRX4P78413 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.66■□□□□ 0.1
IRX4P78413 C2orf69P2-201ENST00000562032 1123 ntBASIC15.66■□□□□ 0.1
IRX4P78413 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.66■□□□□ 0.1
IRX4P78413 RN7SL560P-201ENST00000577943 264 ntBASIC15.66■□□□□ 0.1
IRX4P78413 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
IRX4P78413 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.66■□□□□ 0.1
IRX4P78413 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
IRX4P78413 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
IRX4P78413 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IRX4P78413 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
IRX4P78413 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IRX4P78413 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IRX4P78413 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.66■□□□□ 0.1
IRX4P78413 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IRX4P78413 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
IRX4P78413 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IRX4P78413 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
IRX4P78413 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IRX4P78413 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
IRX4P78413 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
IRX4P78413 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IRX4P78413 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
IRX4P78413 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.65■□□□□ 0.1
IRX4P78413 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
IRX4P78413 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IRX4P78413 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.65■□□□□ 0.1
IRX4P78413 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IRX4P78413 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.65■□□□□ 0.1
IRX4P78413 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
IRX4P78413 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
IRX4P78413 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.65■□□□□ 0.1
IRX4P78413 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
IRX4P78413 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.65■□□□□ 0.1
IRX4P78413 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
IRX4P78413 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IRX4P78413 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IRX4P78413 FGD5P1-202ENST00000614866 2498 ntBASIC15.65■□□□□ 0.1
IRX4P78413 AJ011931.1-201ENST00000618749 2492 ntBASIC15.65■□□□□ 0.1
IRX4P78413 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.65■□□□□ 0.1
IRX4P78413 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IRX4P78413 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IRX4P78413 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.65■□□□□ 0.1
IRX4P78413 ELK2AP-201ENST00000392510 1007 ntBASIC15.65■□□□□ 0.1
IRX4P78413 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.65■□□□□ 0.1
IRX4P78413 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.65■□□□□ 0.1
IRX4P78413 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.65■□□□□ 0.1
IRX4P78413 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.65■□□□□ 0.1
IRX4P78413 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.65■□□□□ 0.1
IRX4P78413 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
IRX4P78413 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.65■□□□□ 0.1
IRX4P78413 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.65■□□□□ 0.1
IRX4P78413 AC079316.1-201ENST00000548397 411 ntBASIC15.65■□□□□ 0.1
IRX4P78413 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.65■□□□□ 0.1
IRX4P78413 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.65■□□□□ 0.1
IRX4P78413 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.65■□□□□ 0.1
IRX4P78413 AC124283.3-201ENST00000570869 594 ntBASIC15.65■□□□□ 0.1
IRX4P78413 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
IRX4P78413 AC091271.1-201ENST00000611877 1162 ntBASIC15.65■□□□□ 0.1
IRX4P78413 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.65■□□□□ 0.1
IRX4P78413 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IRX4P78413 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IRX4P78413 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
IRX4P78413 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
IRX4P78413 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IRX4P78413 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.65■□□□□ 0.1
IRX4P78413 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IRX4P78413 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IRX4P78413 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.65■□□□□ 0.1
IRX4P78413 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IRX4P78413 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
IRX4P78413 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
IRX4P78413 INTS4P2-202ENST00000614726 2019 ntBASIC15.65■□□□□ 0.1
IRX4P78413 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IRX4P78413 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IRX4P78413 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
IRX4P78413 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IRX4P78413 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
IRX4P78413 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
IRX4P78413 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
IRX4P78413 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
IRX4P78413 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
IRX4P78413 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.64■□□□□ 0.09
IRX4P78413 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms