Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 USP32P1-208ENST00000506594 1164 ntBASIC14.13□□□□□ -0.15
RAE1P78406 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.13□□□□□ -0.15
RAE1P78406 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
RAE1P78406 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.13□□□□□ -0.15
RAE1P78406 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAE1P78406 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.13□□□□□ -0.15
RAE1P78406 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.13□□□□□ -0.15
RAE1P78406 AC103988.2-201ENST00000561804 725 ntBASIC14.13□□□□□ -0.15
RAE1P78406 AC025279.2-201ENST00000569730 653 ntBASIC14.13□□□□□ -0.15
RAE1P78406 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.13□□□□□ -0.15
RAE1P78406 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.13□□□□□ -0.15
RAE1P78406 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.13□□□□□ -0.15
RAE1P78406 BX088702.1-201ENST00000610784 235 ntBASIC14.13□□□□□ -0.15
RAE1P78406 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.13□□□□□ -0.15
RAE1P78406 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAE1P78406 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAE1P78406 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAE1P78406 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAE1P78406 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.13□□□□□ -0.15
RAE1P78406 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAE1P78406 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
RAE1P78406 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.13□□□□□ -0.15
RAE1P78406 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.13□□□□□ -0.15
RAE1P78406 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAE1P78406 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAE1P78406 AC016397.2-201ENST00000624848 1985 ntBASIC14.13□□□□□ -0.15
RAE1P78406 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAE1P78406 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RAE1P78406 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.12□□□□□ -0.15
RAE1P78406 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
RAE1P78406 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAE1P78406 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAE1P78406 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAE1P78406 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAE1P78406 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAE1P78406 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.12□□□□□ -0.15
RAE1P78406 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAE1P78406 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
RAE1P78406 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.12□□□□□ -0.15
RAE1P78406 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAE1P78406 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAE1P78406 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.12□□□□□ -0.15
RAE1P78406 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAE1P78406 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAE1P78406 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RAE1P78406 AC092933.1-201ENST00000393644 945 ntBASIC14.12□□□□□ -0.15
RAE1P78406 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.12□□□□□ -0.15
RAE1P78406 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
RAE1P78406 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAE1P78406 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.12□□□□□ -0.15
RAE1P78406 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.12□□□□□ -0.15
RAE1P78406 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.12□□□□□ -0.15
RAE1P78406 AP003171.2-201ENST00000528208 925 ntBASIC14.12□□□□□ -0.15
RAE1P78406 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.12□□□□□ -0.15
RAE1P78406 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.12□□□□□ -0.15
RAE1P78406 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAE1P78406 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.12□□□□□ -0.15
RAE1P78406 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.12□□□□□ -0.15
RAE1P78406 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.12□□□□□ -0.15
RAE1P78406 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
RAE1P78406 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAE1P78406 AP000593.2-201ENST00000542775 1433 ntBASIC14.12□□□□□ -0.15
RAE1P78406 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAE1P78406 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAE1P78406 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
RAE1P78406 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAE1P78406 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAE1P78406 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAE1P78406 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAE1P78406 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAE1P78406 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAE1P78406 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.12□□□□□ -0.15
RAE1P78406 AC005840.4-201ENST00000541242 2494 ntBASIC14.12□□□□□ -0.15
RAE1P78406 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
RAE1P78406 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.11□□□□□ -0.15
RAE1P78406 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
RAE1P78406 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.11□□□□□ -0.15
RAE1P78406 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 AC139712.1-201ENST00000378256 1875 ntBASIC14.11□□□□□ -0.15
RAE1P78406 AC005229.1-201ENST00000392885 409 ntBASIC14.11□□□□□ -0.15
RAE1P78406 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 RN7SKP175-201ENST00000408472 289 ntBASIC14.11□□□□□ -0.15
RAE1P78406 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.11□□□□□ -0.15
RAE1P78406 TMEM14DP-201ENST00000422205 345 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms