Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.96□□□□□ -0.17
PER3P56645 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.96□□□□□ -0.17
PER3P56645 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC13.96□□□□□ -0.17
PER3P56645 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.96□□□□□ -0.17
PER3P56645 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.96□□□□□ -0.17
PER3P56645 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
PER3P56645 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PER3P56645 AC020914.3-201ENST00000594712 304 ntBASIC13.96□□□□□ -0.17
PER3P56645 AC093813.1-201ENST00000605066 256 ntBASIC13.96□□□□□ -0.17
PER3P56645 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.96□□□□□ -0.17
PER3P56645 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.96□□□□□ -0.17
PER3P56645 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.96□□□□□ -0.17
PER3P56645 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PER3P56645 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PER3P56645 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PER3P56645 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PER3P56645 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.96□□□□□ -0.17
PER3P56645 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
PER3P56645 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.17
PER3P56645 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
PER3P56645 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
PER3P56645 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.96□□□□□ -0.17
PER3P56645 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PER3P56645 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PER3P56645 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
PER3P56645 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
PER3P56645 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
PER3P56645 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PER3P56645 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
PER3P56645 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
PER3P56645 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.96□□□□□ -0.18
PER3P56645 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PER3P56645 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.96□□□□□ -0.18
PER3P56645 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PER3P56645 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.18
PER3P56645 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
PER3P56645 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.96□□□□□ -0.18
PER3P56645 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
PER3P56645 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PER3P56645 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PER3P56645 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PER3P56645 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.95□□□□□ -0.18
PER3P56645 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PER3P56645 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PER3P56645 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
PER3P56645 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
PER3P56645 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.95□□□□□ -0.18
PER3P56645 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.95□□□□□ -0.18
PER3P56645 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PER3P56645 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
PER3P56645 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PER3P56645 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.95□□□□□ -0.18
PER3P56645 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PER3P56645 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
PER3P56645 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PER3P56645 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PER3P56645 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PER3P56645 AC138028.6-201ENST00000616106 1482 ntBASIC13.95□□□□□ -0.18
PER3P56645 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.95□□□□□ -0.18
PER3P56645 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
PER3P56645 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PER3P56645 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PER3P56645 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PER3P56645 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
PER3P56645 AL662890.1-201ENST00000396818 632 ntBASIC13.95□□□□□ -0.18
PER3P56645 CNN2P8-201ENST00000421872 913 ntBASIC13.95□□□□□ -0.18
PER3P56645 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.95□□□□□ -0.18
PER3P56645 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PER3P56645 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PER3P56645 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.95□□□□□ -0.18
PER3P56645 AC022137.2-201ENST00000503482 481 ntBASIC13.95□□□□□ -0.18
PER3P56645 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.95□□□□□ -0.18
PER3P56645 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.95□□□□□ -0.18
PER3P56645 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.95□□□□□ -0.18
PER3P56645 AC005252.2-201ENST00000624630 1141 ntBASIC13.95□□□□□ -0.18
PER3P56645 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.95□□□□□ -0.18
PER3P56645 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
PER3P56645 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PER3P56645 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.95□□□□□ -0.18
PER3P56645 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
PER3P56645 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PER3P56645 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PER3P56645 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.95□□□□□ -0.18
PER3P56645 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PER3P56645 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PER3P56645 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
PER3P56645 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
PER3P56645 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.95□□□□□ -0.18
PER3P56645 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PER3P56645 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PER3P56645 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.95□□□□□ -0.18
PER3P56645 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.95□□□□□ -0.18
PER3P56645 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PER3P56645 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.94□□□□□ -0.18
PER3P56645 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
PER3P56645 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PER3P56645 LINC02447-202ENST00000501888 2146 ntBASIC13.94□□□□□ -0.18
PER3P56645 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.94□□□□□ -0.18
PER3P56645 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.94□□□□□ -0.18
PER3P56645 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms