Protein–RNA interactions for Protein: P55789

GFER, FAD-linked sulfhydryl oxidase ALR, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFERP55789 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
GFERP55789 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.2□□□□□ -0.14
GFERP55789 AC092384.3-202ENST00000564646 2873 ntBASIC14.2□□□□□ -0.14
GFERP55789 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GFERP55789 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.2□□□□□ -0.14
GFERP55789 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GFERP55789 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GFERP55789 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GFERP55789 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GFERP55789 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GFERP55789 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.2□□□□□ -0.14
GFERP55789 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GFERP55789 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
GFERP55789 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GFERP55789 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GFERP55789 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
GFERP55789 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
GFERP55789 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GFERP55789 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GFERP55789 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.2□□□□□ -0.14
GFERP55789 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.2□□□□□ -0.14
GFERP55789 SCARNA21-201ENST00000517026 139 ntBASIC14.2□□□□□ -0.14
GFERP55789 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
GFERP55789 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
GFERP55789 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.2□□□□□ -0.14
GFERP55789 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.2□□□□□ -0.14
GFERP55789 CHMP4BP1-201ENST00000556017 588 ntBASIC14.2□□□□□ -0.14
GFERP55789 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.2□□□□□ -0.14
GFERP55789 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.2□□□□□ -0.14
GFERP55789 SNORD3B-2-202ENST00000571722 791 ntBASIC14.2□□□□□ -0.14
GFERP55789 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.2□□□□□ -0.14
GFERP55789 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
GFERP55789 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
GFERP55789 AL136295.7-201ENST00000619226 1200 ntBASIC14.2□□□□□ -0.14
GFERP55789 AL805961.1-203ENST00000641078 1258 ntBASIC14.2□□□□□ -0.14
GFERP55789 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
GFERP55789 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GFERP55789 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GFERP55789 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GFERP55789 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.2□□□□□ -0.14
GFERP55789 AC136759.1-202ENST00000530858 2194 ntBASIC14.2□□□□□ -0.14
GFERP55789 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
GFERP55789 AC008132.1-202ENST00000342005 1389 ntBASIC14.2□□□□□ -0.14
GFERP55789 AL136172.1-201ENST00000598590 1394 ntBASIC14.2□□□□□ -0.14
GFERP55789 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GFERP55789 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GFERP55789 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.2□□□□□ -0.14
GFERP55789 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.2□□□□□ -0.14
GFERP55789 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GFERP55789 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
GFERP55789 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.19□□□□□ -0.14
GFERP55789 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
GFERP55789 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
GFERP55789 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GFERP55789 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
GFERP55789 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
GFERP55789 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GFERP55789 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.19□□□□□ -0.14
GFERP55789 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GFERP55789 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.19□□□□□ -0.14
GFERP55789 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.19□□□□□ -0.14
GFERP55789 HLA-J-204ENST00000495278 958 ntBASIC14.19□□□□□ -0.14
GFERP55789 AC125604.1-201ENST00000496255 707 ntBASIC14.19□□□□□ -0.14
GFERP55789 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.19□□□□□ -0.14
GFERP55789 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.19□□□□□ -0.14
GFERP55789 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.19□□□□□ -0.14
GFERP55789 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.19□□□□□ -0.14
GFERP55789 AC105129.2-201ENST00000559536 390 ntBASIC14.19□□□□□ -0.14
GFERP55789 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GFERP55789 MIR3619-201ENST00000579667 83 ntBASIC14.19□□□□□ -0.14
GFERP55789 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GFERP55789 AC097724.1-201ENST00000609581 426 ntBASIC14.19□□□□□ -0.14
GFERP55789 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.19□□□□□ -0.14
GFERP55789 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GFERP55789 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.19□□□□□ -0.14
GFERP55789 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.19□□□□□ -0.14
GFERP55789 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GFERP55789 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GFERP55789 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GFERP55789 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
GFERP55789 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GFERP55789 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GFERP55789 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
GFERP55789 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
GFERP55789 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GFERP55789 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GFERP55789 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.19□□□□□ -0.14
GFERP55789 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GFERP55789 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GFERP55789 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GFERP55789 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GFERP55789 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GFERP55789 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
GFERP55789 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.18□□□□□ -0.14
GFERP55789 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFERP55789 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFERP55789 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFERP55789 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
GFERP55789 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.18□□□□□ -0.14
GFERP55789 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms