Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
CDH13P55290 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH13P55290 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH13P55290 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.67□□□□□ -0.06
CDH13P55290 INTS4P2-202ENST00000614726 2019 ntBASIC14.67□□□□□ -0.06
CDH13P55290 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CDH13P55290 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CDH13P55290 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.67□□□□□ -0.06
CDH13P55290 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH13P55290 AL139094.1-201ENST00000405549 1188 ntBASIC14.67□□□□□ -0.06
CDH13P55290 NUS1P3-201ENST00000423502 862 ntBASIC14.67□□□□□ -0.06
CDH13P55290 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.67□□□□□ -0.06
CDH13P55290 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH13P55290 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.67□□□□□ -0.06
CDH13P55290 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.67□□□□□ -0.06
CDH13P55290 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH13P55290 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH13P55290 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH13P55290 AC120045.2-201ENST00000567334 178 ntBASIC14.67□□□□□ -0.06
CDH13P55290 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.67□□□□□ -0.06
CDH13P55290 PRSS30P-206ENST00000641773 873 ntBASIC14.67□□□□□ -0.06
CDH13P55290 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH13P55290 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH13P55290 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH13P55290 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH13P55290 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
CDH13P55290 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH13P55290 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CDH13P55290 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CDH13P55290 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CDH13P55290 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CDH13P55290 AGGF1P1-201ENST00000509500 2073 ntBASIC14.67□□□□□ -0.06
CDH13P55290 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.67□□□□□ -0.06
CDH13P55290 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH13P55290 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH13P55290 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CDH13P55290 AC010327.5-201ENST00000586923 3061 ntBASIC14.67□□□□□ -0.06
CDH13P55290 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
CDH13P55290 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDH13P55290 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH13P55290 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH13P55290 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH13P55290 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CDH13P55290 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
CDH13P55290 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH13P55290 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH13P55290 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH13P55290 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH13P55290 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH13P55290 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH13P55290 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH13P55290 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CDH13P55290 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH13P55290 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH13P55290 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH13P55290 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.66□□□□□ -0.06
CDH13P55290 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH13P55290 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH13P55290 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CDH13P55290 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH13P55290 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH13P55290 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH13P55290 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH13P55290 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH13P55290 MEP1AP4-201ENST00000423244 1087 ntBASIC14.66□□□□□ -0.06
CDH13P55290 AC134915.1-201ENST00000426461 574 ntBASIC14.66□□□□□ -0.06
CDH13P55290 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.66□□□□□ -0.06
CDH13P55290 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.66□□□□□ -0.06
CDH13P55290 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH13P55290 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.66□□□□□ -0.06
CDH13P55290 AP001582.1-201ENST00000525856 295 ntBASIC14.66□□□□□ -0.06
CDH13P55290 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.66□□□□□ -0.06
CDH13P55290 AC007431.3-201ENST00000623221 587 ntBASIC14.66□□□□□ -0.06
CDH13P55290 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.66□□□□□ -0.06
CDH13P55290 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CDH13P55290 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH13P55290 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH13P55290 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH13P55290 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
CDH13P55290 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH13P55290 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CDH13P55290 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH13P55290 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH13P55290 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
CDH13P55290 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH13P55290 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH13P55290 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
CDH13P55290 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH13P55290 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH13P55290 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH13P55290 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH13P55290 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.65□□□□□ -0.06
CDH13P55290 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH13P55290 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH13P55290 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH13P55290 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH13P55290 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH13P55290 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH13P55290 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH13P55290 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms