Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDK7P50613 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CDK7P50613 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDK7P50613 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDK7P50613 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.43■□□□□ 0.22
CDK7P50613 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.43■□□□□ 0.22
CDK7P50613 CICP11-201ENST00000434745 2827 ntBASIC16.43■□□□□ 0.22
CDK7P50613 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDK7P50613 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDK7P50613 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDK7P50613 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDK7P50613 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDK7P50613 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.43■□□□□ 0.22
CDK7P50613 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDK7P50613 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDK7P50613 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDK7P50613 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC16.43■□□□□ 0.22
CDK7P50613 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDK7P50613 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
CDK7P50613 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16.43■□□□□ 0.22
CDK7P50613 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.43■□□□□ 0.22
CDK7P50613 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.43■□□□□ 0.22
CDK7P50613 BX088702.1-201ENST00000610784 235 ntBASIC16.43■□□□□ 0.22
CDK7P50613 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
CDK7P50613 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDK7P50613 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDK7P50613 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CDK7P50613 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CDK7P50613 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDK7P50613 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDK7P50613 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.43■□□□□ 0.22
CDK7P50613 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDK7P50613 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CDK7P50613 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.43■□□□□ 0.22
CDK7P50613 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDK7P50613 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDK7P50613 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CDK7P50613 TCAF2P1-201ENST00000291129 2421 ntBASIC16.43■□□□□ 0.22
CDK7P50613 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDK7P50613 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK7P50613 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK7P50613 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CDK7P50613 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK7P50613 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK7P50613 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDK7P50613 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDK7P50613 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK7P50613 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDK7P50613 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.42■□□□□ 0.22
CDK7P50613 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDK7P50613 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.42■□□□□ 0.22
CDK7P50613 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK7P50613 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDK7P50613 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK7P50613 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK7P50613 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDK7P50613 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.42■□□□□ 0.22
CDK7P50613 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC16.42■□□□□ 0.22
CDK7P50613 KRT18P66-201ENST00000452970 1269 ntBASIC16.42■□□□□ 0.22
CDK7P50613 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC16.42■□□□□ 0.22
CDK7P50613 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.42■□□□□ 0.22
CDK7P50613 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC16.42■□□□□ 0.22
CDK7P50613 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.42■□□□□ 0.22
CDK7P50613 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC16.42■□□□□ 0.22
CDK7P50613 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.42■□□□□ 0.22
CDK7P50613 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.42■□□□□ 0.22
CDK7P50613 AC027601.3-201ENST00000622907 509 ntBASIC16.42■□□□□ 0.22
CDK7P50613 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK7P50613 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK7P50613 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.42■□□□□ 0.22
CDK7P50613 AP005117.1-202ENST00000581724 1908 ntBASIC16.42■□□□□ 0.22
CDK7P50613 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDK7P50613 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK7P50613 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDK7P50613 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.42■□□□□ 0.22
CDK7P50613 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
CDK7P50613 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.42■□□□□ 0.22
CDK7P50613 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.42■□□□□ 0.22
CDK7P50613 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDK7P50613 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK7P50613 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK7P50613 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.42■□□□□ 0.22
CDK7P50613 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.42■□□□□ 0.22
CDK7P50613 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK7P50613 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.42■□□□□ 0.22
CDK7P50613 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK7P50613 AC012508.2-201ENST00000567613 1472 ntBASIC16.42■□□□□ 0.22
CDK7P50613 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC16.41■□□□□ 0.22
CDK7P50613 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CDK7P50613 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDK7P50613 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK7P50613 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.41■□□□□ 0.22
CDK7P50613 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK7P50613 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.41■□□□□ 0.22
CDK7P50613 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.41■□□□□ 0.22
CDK7P50613 AC144522.1-201ENST00000625111 1658 ntBASIC16.41■□□□□ 0.22
CDK7P50613 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK7P50613 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms