Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.39■□□□□ 0.21
CPT1AP50416 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.39■□□□□ 0.21
CPT1AP50416 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPT1AP50416 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPT1AP50416 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPT1AP50416 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.39■□□□□ 0.21
CPT1AP50416 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CPT1AP50416 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPT1AP50416 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPT1AP50416 KRT18P36-201ENST00000411618 1276 ntBASIC16.39■□□□□ 0.21
CPT1AP50416 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CPT1AP50416 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.39■□□□□ 0.21
CPT1AP50416 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CPT1AP50416 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
CPT1AP50416 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.39■□□□□ 0.21
CPT1AP50416 AC092171.5-201ENST00000608012 942 ntBASIC16.39■□□□□ 0.21
CPT1AP50416 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.39■□□□□ 0.21
CPT1AP50416 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.39■□□□□ 0.21
CPT1AP50416 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CPT1AP50416 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPT1AP50416 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CPT1AP50416 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPT1AP50416 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPT1AP50416 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPT1AP50416 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPT1AP50416 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPT1AP50416 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
CPT1AP50416 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CPT1AP50416 LINC01101-201ENST00000622953 1884 ntBASIC16.39■□□□□ 0.21
CPT1AP50416 KRT18P9-201ENST00000604826 1300 ntBASIC16.39■□□□□ 0.21
CPT1AP50416 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPT1AP50416 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CPT1AP50416 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CPT1AP50416 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPT1AP50416 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPT1AP50416 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPT1AP50416 AL136172.1-201ENST00000598590 1394 ntBASIC16.38■□□□□ 0.21
CPT1AP50416 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.38■□□□□ 0.21
CPT1AP50416 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPT1AP50416 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CPT1AP50416 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.38■□□□□ 0.21
CPT1AP50416 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.38■□□□□ 0.21
CPT1AP50416 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPT1AP50416 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.38■□□□□ 0.21
CPT1AP50416 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CPT1AP50416 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.38■□□□□ 0.21
CPT1AP50416 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.38■□□□□ 0.21
CPT1AP50416 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
CPT1AP50416 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
CPT1AP50416 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPT1AP50416 AC009093.10-201ENST00000641956 1442 ntBASIC16.38■□□□□ 0.21
CPT1AP50416 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPT1AP50416 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.38■□□□□ 0.21
CPT1AP50416 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPT1AP50416 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPT1AP50416 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPT1AP50416 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
CPT1AP50416 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPT1AP50416 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPT1AP50416 AP000356.3-201ENST00000382243 753 ntBASIC16.38■□□□□ 0.21
CPT1AP50416 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPT1AP50416 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CPT1AP50416 RPSAP31-201ENST00000416648 895 ntBASIC16.38■□□□□ 0.21
CPT1AP50416 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CPT1AP50416 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CPT1AP50416 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.38■□□□□ 0.21
CPT1AP50416 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CPT1AP50416 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CPT1AP50416 AP000358.1-201ENST00000456260 156 ntBASIC16.38■□□□□ 0.21
CPT1AP50416 RN7SL8P-201ENST00000461771 266 ntBASIC16.38■□□□□ 0.21
CPT1AP50416 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.38■□□□□ 0.21
CPT1AP50416 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.38■□□□□ 0.21
CPT1AP50416 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.38■□□□□ 0.21
CPT1AP50416 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.38■□□□□ 0.21
CPT1AP50416 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CPT1AP50416 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.38■□□□□ 0.21
CPT1AP50416 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
CPT1AP50416 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.38■□□□□ 0.21
CPT1AP50416 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPT1AP50416 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CPT1AP50416 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CPT1AP50416 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPT1AP50416 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CPT1AP50416 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.38■□□□□ 0.21
CPT1AP50416 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CPT1AP50416 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.38■□□□□ 0.21
CPT1AP50416 AC092135.3-201ENST00000624151 1846 ntBASIC16.38■□□□□ 0.21
CPT1AP50416 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CPT1AP50416 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.38■□□□□ 0.21
CPT1AP50416 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
CPT1AP50416 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.38■□□□□ 0.21
CPT1AP50416 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CPT1AP50416 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.37■□□□□ 0.21
CPT1AP50416 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPT1AP50416 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPT1AP50416 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.37■□□□□ 0.21
CPT1AP50416 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CPT1AP50416 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
CPT1AP50416 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.37■□□□□ 0.21
CPT1AP50416 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms