Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 IQSEC3P1-201ENST00000538799 536 ntBASIC17.66■□□□□ 0.42
TNNI2P48788 MIR3147-201ENST00000577811 66 ntBASIC17.66■□□□□ 0.42
TNNI2P48788 NAT9-211ENST00000580632 799 ntTSL 3 BASIC17.66■□□□□ 0.42
TNNI2P48788 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC17.66■□□□□ 0.42
TNNI2P48788 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNNI2P48788 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNNI2P48788 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNNI2P48788 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TNNI2P48788 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TNNI2P48788 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TNNI2P48788 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TNNI2P48788 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TNNI2P48788 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.66■□□□□ 0.42
TNNI2P48788 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.66■□□□□ 0.42
TNNI2P48788 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TNNI2P48788 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNNI2P48788 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNNI2P48788 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.66■□□□□ 0.42
TNNI2P48788 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TNNI2P48788 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
TNNI2P48788 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNNI2P48788 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNNI2P48788 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.65■□□□□ 0.42
TNNI2P48788 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNNI2P48788 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.65■□□□□ 0.42
TNNI2P48788 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.65■□□□□ 0.42
TNNI2P48788 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNNI2P48788 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TNNI2P48788 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNNI2P48788 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNNI2P48788 KRT8P21-201ENST00000430398 1491 ntBASIC17.65■□□□□ 0.42
TNNI2P48788 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNNI2P48788 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TNNI2P48788 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TNNI2P48788 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TNNI2P48788 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNNI2P48788 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TNNI2P48788 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNNI2P48788 FGFR3P1-201ENST00000449999 601 ntBASIC17.65■□□□□ 0.42
TNNI2P48788 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
TNNI2P48788 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TNNI2P48788 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC17.65■□□□□ 0.42
TNNI2P48788 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC17.65■□□□□ 0.42
TNNI2P48788 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
TNNI2P48788 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC17.65■□□□□ 0.42
TNNI2P48788 AC018635.2-201ENST00000608625 364 ntBASIC17.65■□□□□ 0.42
TNNI2P48788 BX088702.1-201ENST00000610784 235 ntBASIC17.65■□□□□ 0.42
TNNI2P48788 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNNI2P48788 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC17.65■□□□□ 0.42
TNNI2P48788 COX6A1P2-201ENST00000620597 330 ntBASIC17.65■□□□□ 0.42
TNNI2P48788 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC17.65■□□□□ 0.42
TNNI2P48788 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TNNI2P48788 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TNNI2P48788 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TNNI2P48788 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.65■□□□□ 0.42
TNNI2P48788 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNNI2P48788 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNNI2P48788 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TNNI2P48788 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNNI2P48788 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNNI2P48788 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNNI2P48788 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNNI2P48788 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNNI2P48788 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNNI2P48788 PPT1-215ENST00000641471 2368 ntBASIC17.65■□□□□ 0.42
TNNI2P48788 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TNNI2P48788 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.64■□□□□ 0.42
TNNI2P48788 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
TNNI2P48788 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNNI2P48788 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNNI2P48788 AC112693.3-201ENST00000624819 1983 ntBASIC17.64■□□□□ 0.41
TNNI2P48788 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
TNNI2P48788 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNNI2P48788 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TNNI2P48788 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TNNI2P48788 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.64■□□□□ 0.41
TNNI2P48788 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TNNI2P48788 SALL4P5-201ENST00000419001 1760 ntBASIC17.64■□□□□ 0.41
TNNI2P48788 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TNNI2P48788 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.64■□□□□ 0.41
TNNI2P48788 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNNI2P48788 AC073347.1-201ENST00000421633 2643 ntBASIC17.64■□□□□ 0.41
TNNI2P48788 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.64■□□□□ 0.41
TNNI2P48788 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TNNI2P48788 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNNI2P48788 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.64■□□□□ 0.41
TNNI2P48788 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TNNI2P48788 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC17.64■□□□□ 0.41
TNNI2P48788 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC17.64■□□□□ 0.41
TNNI2P48788 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC17.64■□□□□ 0.41
TNNI2P48788 CICP12-201ENST00000455801 843 ntBASIC17.64■□□□□ 0.41
TNNI2P48788 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNNI2P48788 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.64■□□□□ 0.41
TNNI2P48788 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC17.64■□□□□ 0.41
TNNI2P48788 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC17.64■□□□□ 0.41
TNNI2P48788 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC17.64■□□□□ 0.41
TNNI2P48788 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
TNNI2P48788 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TNNI2P48788 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TNNI2P48788 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms