Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ARCN1P48444 FO681548.1-201ENST00000455617 1132 ntBASIC14.97□□□□□ -0.01
ARCN1P48444 CROCCP4-201ENST00000457096 498 ntBASIC14.97□□□□□ -0.01
ARCN1P48444 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.97□□□□□ -0.01
ARCN1P48444 AC009486.1-201ENST00000569860 813 ntBASIC14.97□□□□□ -0.01
ARCN1P48444 MIR5189-201ENST00000577370 114 ntBASIC14.97□□□□□ -0.01
ARCN1P48444 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.97□□□□□ -0.01
ARCN1P48444 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
ARCN1P48444 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.97□□□□□ -0.01
ARCN1P48444 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ARCN1P48444 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ARCN1P48444 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ARCN1P48444 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.97□□□□□ -0.01
ARCN1P48444 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ARCN1P48444 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ARCN1P48444 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ARCN1P48444 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
ARCN1P48444 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ARCN1P48444 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
ARCN1P48444 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.97□□□□□ -0.01
ARCN1P48444 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.97□□□□□ -0.01
ARCN1P48444 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ARCN1P48444 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.97□□□□□ -0.01
ARCN1P48444 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.97□□□□□ -0.01
ARCN1P48444 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.97□□□□□ -0.01
ARCN1P48444 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
ARCN1P48444 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ARCN1P48444 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ARCN1P48444 AC152010.1-201ENST00000415779 2006 ntBASIC14.97□□□□□ -0.01
ARCN1P48444 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ARCN1P48444 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ARCN1P48444 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
ARCN1P48444 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ARCN1P48444 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ARCN1P48444 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
ARCN1P48444 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.96□□□□□ -0.01
ARCN1P48444 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.96□□□□□ -0.01
ARCN1P48444 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.96□□□□□ -0.01
ARCN1P48444 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.96□□□□□ -0.01
ARCN1P48444 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ARCN1P48444 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.96□□□□□ -0.01
ARCN1P48444 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ARCN1P48444 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ARCN1P48444 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ARCN1P48444 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
ARCN1P48444 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
ARCN1P48444 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ARCN1P48444 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.96□□□□□ -0.01
ARCN1P48444 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ARCN1P48444 OR8S1-201ENST00000310194 1080 ntBASIC14.96□□□□□ -0.01
ARCN1P48444 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ARCN1P48444 RN7SKP230-201ENST00000365642 335 ntBASIC14.96□□□□□ -0.01
ARCN1P48444 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.96□□□□□ -0.01
ARCN1P48444 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.96□□□□□ -0.01
ARCN1P48444 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ARCN1P48444 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.96□□□□□ -0.01
ARCN1P48444 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.96□□□□□ -0.01
ARCN1P48444 KRT17P8-201ENST00000540749 863 ntBASIC14.96□□□□□ -0.01
ARCN1P48444 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ARCN1P48444 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
ARCN1P48444 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.96□□□□□ -0.01
ARCN1P48444 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.96□□□□□ -0.01
ARCN1P48444 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
ARCN1P48444 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.96□□□□□ -0.01
ARCN1P48444 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ARCN1P48444 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.96□□□□□ -0.01
ARCN1P48444 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.96□□□□□ -0.01
ARCN1P48444 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ARCN1P48444 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ARCN1P48444 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ARCN1P48444 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.96□□□□□ -0.01
ARCN1P48444 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ARCN1P48444 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.96□□□□□ -0.01
ARCN1P48444 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
ARCN1P48444 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
ARCN1P48444 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
ARCN1P48444 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.96□□□□□ -0.02
ARCN1P48444 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
ARCN1P48444 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.96□□□□□ -0.02
ARCN1P48444 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ARCN1P48444 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ARCN1P48444 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ARCN1P48444 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ARCN1P48444 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ARCN1P48444 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ARCN1P48444 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
ARCN1P48444 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ARCN1P48444 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.95□□□□□ -0.02
ARCN1P48444 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ARCN1P48444 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ARCN1P48444 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.95□□□□□ -0.02
ARCN1P48444 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ARCN1P48444 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ARCN1P48444 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ARCN1P48444 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
ARCN1P48444 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.95□□□□□ -0.02
ARCN1P48444 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ARCN1P48444 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
ARCN1P48444 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ARCN1P48444 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms